Gene Information

Name : YE3411 (YE3411)
Accession : YP_001007577.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 3724129 - 3724566 bp
Length : 438 bp
Strand : +
Note : Similar to many plasmid related proteins including: Escherichia coli plasmid x polypeptide YubQ or YgfA or x or 19 SWALL:X19F_ECOLI (SWALL:P47737) (169 aa) fasta scores: E(): 1.7e-32, 62.12 38d in 132 aa, Plasmid R100 protein X SWALL:BAA78847 (EMBL:AP0003

DNA sequence :
TTGATAGGTTTGTTGTCATTCAATACTTATGCTGACGACTGTTTCGAACGTGCAGGAAGAGATTATCGGATAGACCCCGA
CTTGCTTCGTGCTATTTCGTGGAATGAATCCAAAGGAAACATTCACGCCATCGGAAAAAATCCAGATAACAGTTTAGATA
TCGGCTTAATGCAGATTAATACCCAGCATGAACCTGAATTAAAAAGATACGGGATAACACGCCACCACCTCACAGCAGAT
CCGTGTATGAATATCTACACGGGCGCTTATTATCTTGCGATCGCATTTCGTCACTGGGGCGTTAATTGGGATGCAGTAGG
GGCATACAATGCAGGGTTTGCTAAAAATATAAAGCAAGATAAGCGTCGAAAACACTATGCCAGAAAAATACATGCAACTT
ACGTCGAGATAAAAGCGCAAAAAAAAGCGGCTCATTAA

Protein sequence :
MIGLLSFNTYADDCFERAGRDYRIDPDLLRAISWNESKGNIHAIGKNPDNSLDIGLMQINTQHEPELKRYGITRHHLTAD
PCMNIYTGAYYLAIAFRHWGVNWDAVGAYNAGFAKNIKQDKRRKHYARKIHATYVEIKAQKKAAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
etgA AFO66324.1 putative lytic transglycosylase Not tested SESS LEE Protein 1e-25 44
etgA AFO66404.1 putative lytic transglycosylase Not tested SESS LEE Protein 1e-25 44
unnamed AAC31524.1 L0045 Not tested LEE Protein 3e-23 44
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 3e-23 44
unnamed AAK26704.1 unknown Not tested LEE Protein 7e-24 44
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 4e-23 44
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 4e-23 44
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 1e-23 44
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 1e-23 44
unnamed AAL57531.1 unknown Not tested LEE Protein 7e-24 44
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 7e-24 44
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 7e-24 44
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 1e-16 44
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 8e-17 44
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 8e-17 44
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 1e-16 44
unnamed AAL06358.1 unknown Not tested LEE Protein 6e-24 43
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 3e-22 43
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 3e-22 43
ECs3711 NP_311738.1 hypothetical protein Not tested LIM Protein 7e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE3411 YP_001007577.1 hypothetical protein VFG0823 Protein 1e-23 44
YE3411 YP_001007577.1 hypothetical protein VFG0539 Protein 3e-17 44
YE3411 YP_001007577.1 hypothetical protein VFG0719 Protein 1e-22 43