Gene Information

Name : arsB (YE3365)
Accession : YP_001007537.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 3677524 - 3678813 bp
Length : 1290 bp
Strand : -
Note : -

DNA sequence :
ATGTTACTGGCCGGAGCAATTTTTATCCTGACCATTGTGTTGGTTATCTGGCAGCCGAAGGGGCTAGGGATTGGCTGGAG
CGCCACGCTGGGTGCCATATTGGCACTGGTTTCTGGCGTCGTGCACATTGCCGATATTCCCGTGGTATGGAATATCGTTT
GGAACGCCACAGCAACCTTTATTGCCGTCATTATCATTAGCCTGTTGTTGGATGAGTGCGGCTTTTTTGAGTGGGCGGCA
TTGCATGTTTCCCGTTGGGGCAATGGGCGAGGGCGCTTGCTGTTCACCTATATTGTTCTGCTGGGTGCTGCTGTGGCGGC
TTTGTTTGCTAATGATGGTGCCGCGCTGATTCTTACCCCCATAGTTATCGCCATGCTGCTGGCGCTCGGGTTCAGTAAAC
GCGCCACACTAGCATTTGTGATGGCCGCTGGTTTTATTGCCGATACTGCCAGCTTGCCGCTGATTGTATCGAATCTGGTC
AATATCGTTTCGGCTGACTTCTTTCACCTAGGGTTCACGGAATATGCCTCGGTGATGGTACCTGTGGATATTGCCGCCAT
TATTGCTACGTTGGTGATGCTACATCTGTTCTTTCGCAAAGATATTCCACCATCCTATGATCTGGCCCGACTCAAAGAAC
CCGCACTCGCTATCAAAGATCAGGCGACATTCAGAACCGGCTGGATCGTATTACTCCTGCTGCTGATTGGTTTTTTTGTG
CTTGAGCCGATGGGTATTCCGGTGAGTGCTATTGCGGCAGTGGGAGCGATAATCCTGTTTGCAGTGGCTAAAAGAGGTCA
TGCCATTAACACTGGTAAAGTGTTGCGCGGTGCGCCGTGGCAGATCGTGATTTTCTCACTGGGAATGTATCTGGTTGTTT
ATGGCCTGCGCAACGCTGGGTTAACAGAATACCTTTCTGGCGTATTGAGTGTCCTGGCAGACAACGGTCTTTGGGCAGCC
ACGTTTGGCACGGGATTCTTGACCGCGTTCCTGTCATCGATCATGAACAATATGCCTACAGTACTGGTTGGTGCTCTGTC
TATTGATGGCAGCACCGCGTCTGGCGTTATCAAAGAAGCGATGATTTATGCCAACGTCATTGGTTGCGATCTGGGGCCCA
AAATTACGCCGATTGGTAGCCTGGCGACACTGCTCTGGCTGCATGTGCTGTCACAGAAAAACATGACGATCACCTGGGGA
TACTACTTTCGCACTGGGATTATCATGACTCTACCGGTGCTGTTTGTCACACTGACCGCGCTGGCGCTGCGCCTCTCCCT
CAATCTGTAA

Protein sequence :
MLLAGAIFILTIVLVIWQPKGLGIGWSATLGAILALVSGVVHIADIPVVWNIVWNATATFIAVIIISLLLDECGFFEWAA
LHVSRWGNGRGRLLFTYIVLLGAAVAALFANDGAALILTPIVIAMLLALGFSKRATLAFVMAAGFIADTASLPLIVSNLV
NIVSADFFHLGFTEYASVMVPVDIAAIIATLVMLHLFFRKDIPPSYDLARLKEPALAIKDQATFRTGWIVLLLLLIGFFV
LEPMGIPVSAIAAVGAIILFAVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLSVLADNGLWAA
TFGTGFLTAFLSSIMNNMPTVLVGALSIDGSTASGVIKEAMIYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTITWG
YYFRTGIIMTLPVLFVTLTALALRLSLNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-162 95
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-98 60
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 1e-96 59
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-99 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_001007537.1 arsenical pump membrane protein BAC0576 Protein 2e-160 95
arsB YP_001007537.1 arsenical pump membrane protein BAC0578 Protein 4e-159 94
arsB YP_001007537.1 arsenical pump membrane protein BAC0031 Protein 5e-161 94
arsB YP_001007537.1 arsenical pump membrane protein BAC0577 Protein 1e-152 90
arsB YP_001007537.1 arsenical pump membrane protein BAC0574 Protein 8e-98 59
arsB YP_001007537.1 arsenical pump membrane protein BAC0575 Protein 6e-100 59