|
Name : ribD (YE3161) Accession : YP_001007342.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Unknown Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 3433556 - 3434665 bp Length : 1110 bp Strand : - Note : riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine a DNA sequence : ATGCAGCCCGATGAATTCTATATGGCCCGTGCCTTTGAGTTGGCGCGGCTAGGGCGTTTTACCACGTCACCGAACCCCAA TGTCGGGTGTGTGCTGGTGCGCGATGGCGAGATTGTCGGTGAGGGCTATCATTTACGTGCTGGCGAACCTCATGCCGAGG TGCATGCTTTACGGATGGCGGGCGAGAAAGCACGTGGAGCGACTGCCTATGTCACCCTTGAGCCATGTAGCCACCACGGG CGTACGCCGCCATGTGCTGATGCTTTGCTTACTGCCGGTGTAAAACGCGTGGTAGCCGCGATGCAGGACCCTAATCCGCA AGTTGCCGGGCGCGGGTTATATAAATTAAAACAGGCTGGGGTTGAAGTCGACCACGGTTTGATGCTGGCGGAAGCCGAAG CGGTTAATCTCGGCTTCTTGAAACGGATGCGCACGGGTTTTCCTTATCTGCAATTGAAAATGGCTGCATCCCTGGATGGT CGCACCGCAATGGCCTCGGGTGAAAGCCAGTGGATTACCTCGCCACAAGCGCGTCAGGATGTGCAGCGTTTTCGGGCGCA AAGCTCTGCTATCCTTAGCACCAGTGCCACCGTATTGGCTGATGATCCTGCGCTAACCGTGCGCTGGCAGGAGCTGGATG CACAAACCCAGGCGCTGTACCCTCAAGATGCACTGCGCCAGCCGGTTCGAATTATTGTCGATAGCCATAACCGCGTGACG CCACAGCATAAAGTCATTCAGCAAGACGGCCCGTGTTGGTTAGCTCGAGTTGAGGCAGATGAGCAGTCATGGCCTAACAA TGTCGAGCAATTGTTGCTACCACGTCATGGCAATGGGGTAGATTTAGTCTTATTAATGATGCAATTAGGTAAGCGGCAAA TTAATTCTGTTTGGGTTGAAGCCGGGCCACAATTTGCGGGCGCGCTTTTGCAGGCGGGTGTGGTTGATGAGCTAATTCTG TATATTGCGCCAAAATTGTTAGGCAGCGATGCCCGTGGGTTATGCCAGTTGACTGGGTTAACGCAACTAAGTGATGCCCC TGAATTCGTATTCAGCGAGGTTCGTCAGGTGGGGCCAGACTTACGACTGCGCTTGAAACCGAAGTATTAA Protein sequence : MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMAGEKARGATAYVTLEPCSHHG RTPPCADALLTAGVKRVVAAMQDPNPQVAGRGLYKLKQAGVEVDHGLMLAEAEAVNLGFLKRMRTGFPYLQLKMAASLDG RTAMASGESQWITSPQARQDVQRFRAQSSAILSTSATVLADDPALTVRWQELDAQTQALYPQDALRQPVRIIVDSHNRVT PQHKVIQQDGPCWLARVEADEQSWPNNVEQLLLPRHGNGVDLVLLMMQLGKRQINSVWVEAGPQFAGALLQAGVVDELIL YIAPKLLGSDARGLCQLTGLTQLSDAPEFVFSEVRQVGPDLRLRLKPKY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 8e-62 | 47 |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 8e-62 | 47 |
