Gene Information

Name : ybbA (YE3054)
Accession : YP_001007237.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein YbbA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 3320562 - 3321248 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence :
ATGCCAGCGGAAAACATTCTTGAAGTTCATCATCTTAATAAACACGTCGGTCAGGGTGAGCAACAGCTCTCCATCCTTAC
CGGAGTTGAGCTGGTTGTCAAACCCGCTCAGACAATTGCGCTGATTGGTGAGTCAGGTTCAGGTAAATCAACTTTGCTGG
GAATTCTGGCGGGCCTCGATGATGGCAGTAGCGGCGAAGTGAGTTTACTCGGCCAGTCTTTGACCGCGATGGATGAAGAG
GGGCGAGCGCAGTTGCGGGCAAAAAATGTCGGTTTTGTTTTCCAATCATTTATGTTGGTGCCGACACTTAATACATTGGA
AAACGTACAGCTTCCGGCGCTGTTACGTGGTGAAAGTGAGCGCGAGAGCAAAGTGCATGCCATTGAGCTATTAAAGCTGG
TGGGCCTTGAGAAGCGCCTTCACCACCTTCCTGCCCAACTCTCCGGCGGCGAGCAGCAACGGGTGGCGTTGGCTCGGGCT
TTTAGTGGGCGGCCAAAAGTGTTATTTGCCGATGAGCCAACCGGCAATCTTGACCGCCATACCGGTGACCGTATTGCCGA
CTTACTCTTTTCTCTTAATCGCGACTATGACACTACGCTGATACTGGTAACCCATGATGTGCAACTGGCTGGCCGTTGCC
AGCGTCGGCTGCGGCTACAAGACGGTAAATTGTGGGAGGAAGCATGA

Protein sequence :
MPAENILEVHHLNKHVGQGEQQLSILTGVELVVKPAQTIALIGESGSGKSTLLGILAGLDDGSSGEVSLLGQSLTAMDEE
GRAQLRAKNVGFVFQSFMLVPTLNTLENVQLPALLRGESERESKVHAIELLKLVGLEKRLHHLPAQLSGGEQQRVALARA
FSGRPKVLFADEPTGNLDRHTGDRIADLLFSLNRDYDTTLILVTHDVQLAGRCQRRLRLQDGKLWEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybbA YP_001007237.1 putative ABC transporter ATP-binding protein YbbA NC_008702.1.4606598. Protein 4e-36 47
ybbA YP_001007237.1 putative ABC transporter ATP-binding protein YbbA NC_012469.1.7686878. Protein 7e-38 43
ybbA YP_001007237.1 putative ABC transporter ATP-binding protein YbbA CP001581.1.gene798.p Protein 5e-37 41