Gene Information

Name : YE3040 (YE3040)
Accession : YP_001007224.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Unknown
Product : transposase for insertion element IS3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3308773 - 3309072 bp
Length : 300 bp
Strand : +
Note : Similar to several transposases including: Escherichia coli transposase InsE for insertion sequence IS3a/b/c/d/e/fa/fb SWALL:INSE_ECOLI (SWALL:P77681) (102 aa) fasta scores: E(): 6.2e-26, 82.82 38d in 99 aa and to Salmonella enteritidis insertion sequence

DNA sequence : 
ATGACAAAAGCAGCATCAATCAAAAAACAGCCCCACAAGCAGTACACACCTGAATTTCGTCACGAAGCTCTGAAGCTCGC
TGAACGCATTGGTGTTGCTGCCGCTGCCCGCGAACTCAGTTTGTATGAGTCACAACTCTATGCCTGGCGCAGCAAACGGC
AGAGTCAGCATTCATCTTCCGAACGCGAACAGGAAATGTCTGTCGAAATCGCCCGCCTGAAACGACAACTGGCGGAGCGG
GACGAGGAACTGGCCATTCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA

Protein sequence : 
MTKAASIKKQPHKQYTPEFRHEALKLAERIGVAAAARELSLYESQLYAWRSKRQSQHSSSEREQEMSVEIARLKRQLAER
DEELAILQKAATYFAKRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 2e-26 83
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 2e-26 83
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 2e-26 83
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 2e-26 83
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 3e-24 81
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 2e-24 81
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 2e-24 81
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 3e-24 81

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE3040 YP_001007224.1 transposase for insertion element IS3 VFG1632 Protein 8e-25 81
YE3040 YP_001007224.1 transposase for insertion element IS3 VFG0603 Protein 7e-25 81