Gene Information

Name : copR (YE3024)
Accession : YP_001007213.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Virulence
Product : transcriptional activator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3296382 - 3297071 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence : 
ATGCGACTGTTATTAGTGGAAGATGAAGAAAAAACCTCGTCCTATTTAAGTCGGGCGTTAGGAGAATCGGGCTTTAGCGT
GGATATATCTGCTGATGGTGCAGAGGGGCTGCATTATGCGCTGGAATATGATTACGATGCCATAATCCTTGATGTCATGT
TGCCCGGCATGGATGGCTATCGGGTGCTGGAGGGTATTCGCGCCAGTAAACAAACGCCGATGTTGATGCTTTCAGCTCGA
GGCTCGGTGGATGAGCGCGTCAAAGGCCTGCGTCTTGGTGCCGATGATTATCTGCCTAAACCCTTCTCACTCATTGAGTT
GGTAGCCCGCATTCAAGCGCTAGTGCGTCGCCGCTCGACGGATGGCGCAGATATCACGCAACTACAGATTCATGACCTAC
ATCTGGATCTGCTGGCTCGCCGCGTGTTTCGAACTGGAACCCGGCTGGAACTGACCGCGAAAGAGTTTTCCTTGCTCAGT
CTGCTGGCGCGTCACCAGGGGGAAATCCTGTCAAAAATGATGATCGCCGAGCAAGTCTGGGATATGAATTTCGACAGCGA
TGCCAACGTGGTTGAGGTTGCGATTAAACGTCTGCGCGCCAAGATTGATGCGCCATTTGAGGTCAAGTTACTGCATACCG
TGCGCGGTATGGGCTATGTTCTTGAAGTCAGACCCGACACACTAAATTAA

Protein sequence : 
MRLLLVEDEEKTSSYLSRALGESGFSVDISADGAEGLHYALEYDYDAIILDVMLPGMDGYRVLEGIRASKQTPMLMLSAR
GSVDERVKGLRLGADDYLPKPFSLIELVARIQALVRRRSTDGADITQLQIHDLHLDLLARRVFRTGTRLELTAKEFSLLS
LLARHQGEILSKMMIAEQVWDMNFDSDANVVEVAIKRLRAKIDAPFEVKLLHTVRGMGYVLEVRPDTLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-50 51
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-49 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
copR YP_001007213.1 transcriptional activator BAC0083 Protein 2e-56 60
copR YP_001007213.1 transcriptional activator BAC0125 Protein 3e-59 59
copR YP_001007213.1 transcriptional activator BAC0197 Protein 2e-55 58
copR YP_001007213.1 transcriptional activator BAC0638 Protein 7e-52 58
copR YP_001007213.1 transcriptional activator BAC0111 Protein 2e-55 55
copR YP_001007213.1 transcriptional activator BAC0347 Protein 3e-47 50
copR YP_001007213.1 transcriptional activator BAC0308 Protein 1e-51 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
copR YP_001007213.1 transcriptional activator VFG0596 Protein 2e-50 51
copR YP_001007213.1 transcriptional activator VFG1389 Protein 2e-36 47
copR YP_001007213.1 transcriptional activator VFG1390 Protein 2e-35 44
copR YP_001007213.1 transcriptional activator VFG1386 Protein 4e-34 44