Gene Information

Name : trp1400A (YE2630)
Accession : YP_001006825.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Unknown
Product : IS1400 transposase A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2847764 - 2848051 bp
Length : 288 bp
Strand : -
Note : Previously sequenced as Yersinia enterocolitica IS1400 transposase A Trp1400A SWALL:Q9X9H8 (EMBL:AJ132945) (96 aa) fasta scores: E(): 3e-31, 96.84 38d in 95 aa. Also similar to many others e.g. Yersinia pestis putative transposase Y0084 or Ypcd1.93 SWALL:

DNA sequence :
ATGTCCCCTGAGGAGATCGCTATGCGTAAAATCCGATTCACCGAGCACCAGATCATCGCCGTACTGAAATCAGTCGAAGC
GGGTAGGACCGTCAAAGATGTGTGCCGCGAGGCTGCTATTTCCGAAGCCAGCTATTACAACTGGAAGGCTAAGTATGGCG
GGATGGAAGCGGCTGATATTAAAAAAATCAAAGACCTTGAAGATGAGAACCGACGTCTCAAACAGATGTTTGCTGACCTG
AGTCTGGAAAATCGCGCGTTAAAAGACGTCATTGAAAAAAAGCTTTAA

Protein sequence :
MSPEEIAMRKIRFTEHQIIAVLKSVEAGRTVKDVCREAAISEASYYNWKAKYGGMEAADIKKIKDLEDENRRLKQMFADL
SLENRALKDVIEKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 4e-37 97
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 3e-17 54
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 3e-17 54
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 2e-20 52
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 3e-20 52
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 6e-17 52
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 6e-17 52