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Name : trp1400B (YE2629) Accession : YP_001006824.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Unknown Product : IS1400 transposase B Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2846919 - 2847713 bp Length : 795 bp Strand : - Note : Previously sequenced as Yersinia enterocolitica IS1400 transposase B Trp1400B SWALL:Q9X9H9 (EMBL:AJ132945) (294 aa) fasta scores: E(): 3.3e-107, 99.24 38d in 264 aa Also similar to many others e.g. Yersinia pestis putative transposase Ypcd1.94 SWALL:Q9RI0 DNA sequence : ATGAGCATACGCCAGGCATGCAGGACGTTATCGCTGAGCAGGAAGGTGTTTCGTTATCAACCGAATAAACGACGTGATGA ACCGGTGATCCAGAGGCTGACTGAGGCGGCTGAACGCTATCTCCGCTACGGATTTAAGAAGCTTTTTCAGGTGCTTCGCA GGCAGGGACACGCCTGGAACCACAAGCGTGTACACCGGATTTACTGTCTGCTAAAACTGAATTTTCGTCGTAAAGGGAAA CAACGCCTGCCGGTGCGTAATCCGGCTCCGCTGGCCACGCCGGAAGCCCTCAACCAAAGCTGGTCGATTGATTTTATGCA CGACGCGCTGACATGTGGCCGACGTTTTCGGACTTTCAACGTCGTGGATGATTTTAACCGCGAGGCTCTGGCTATCGAAA TTGACCTGAATATCCCGGCGCAGCGCGTTGTGCGGGTGCTGGACAGAATAGTGGCAAACCGTGGCTATCCGCTGAAAATG CGGATGGATAACGGGCCAGAACTAATATCACTGGCGCTGGCACAATGGGCTGAAGACCATGGCGTGATGCTGGAATTTAT CAAGCCCGGCAAACCGACGCAAAACGCATTTATCGAACGGTTTAACCGAACGTATCGGACCGAAATACTGGATTTTTATC TGTTCAGAACGCTGAATGAAGCACGGGAAATAACGGAACGCTGGCTGAATGAATACAACAGTGAGCGGCCCCATGAATCC CTGAATAACCTGACGCCGGAAGAGTACCGGCTGATGGGTGAAAAACTGGAAATCTCAAAAAGTGTGTGGAACTAA Protein sequence : MSIRQACRTLSLSRKVFRYQPNKRRDEPVIQRLTEAAERYLRYGFKKLFQVLRRQGHAWNHKRVHRIYCLLKLNFRRKGK QRLPVRNPAPLATPEALNQSWSIDFMHDALTCGRRFRTFNVVDDFNREALAIEIDLNIPAQRVVRVLDRIVANRGYPLKM RMDNGPELISLALAQWAEDHGVMLEFIKPGKPTQNAFIERFNRTYRTEILDFYLFRTLNEAREITERWLNEYNSERPHES LNNLTPEEYRLMGEKLEISKSVWN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 2e-122 | 99 |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 1e-34 | 45 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 1e-43 | 43 |
