Gene Information

Name : irp6 (YE2615)
Accession : YP_001006813.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Virulence
Product : lipoprotein inner membrane ABC-transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1132
EC number : -
Position : 2817001 - 2818803 bp
Length : 1803 bp
Strand : -
Note : -

DNA sequence :
ATGTCATCTCAATCATCCAATACTGAATCGATGTCCCGATTTCCTCTCTGGCAGGTGATTAAACCGGTTCGCAGGAAGGT
TATTTTAGCTATGGCGCTGGCGGGGCTGGCGGCATTAACCAGCCTGGGGGCGCTCCTTTTTCTGGCGTGGAGCCTGCGCG
ACATTCGCGCGACGCCTGACACTATTCCGGTCTGGCCGCTGGGCGGCGTGATCGGCTGCGTGGTCTTAACTTTTGTTCTG
CGCTTGCAGGCGTTCAATACCTCTCATTACGCGGCTTTTCATCTGGAGAACATTCTACGCAGTAGGTTAGCCCGTAAAGC
ATTGCAGCTTCCGCCTGGCGTGTTACAGCAAATGGGTAGCGGGTCAGTGGCGAAAGTGATGCTGGATGACGTGAAGTCGT
TACATATCTTTGTGGCTGACAGCACGCCACTCTATGCCCGCGCGATCATCATGCCGCTGGCGACAATCGTTATCTTGTTC
TGGCTGGACTGGCGGCTGGCAATCGCGACGTTGGGGGTACTGGCGTTTGGATCGGTTGTTCTCGTGCTCGCCCGCCAGCG
CTCGGAAGATATGGCTCAGCGTTATCATAAGGCGCGCGAGCAGGTCAGTGCGGCGGTTATTGAGTTCGTGCAGGCCATGC
CCGTGGTGAGAACGTTTGATAGCGGCAGTACCAGTTTTTTGCGTTATCAACGCGCCCTTGAAGAGTGGGTCGATGTGCTC
AAAACCTGGTATCGCAAAGCCGGTTTTTCAGCGCGTTTTTCCTTCTCGATTCTGAATCCTCTCCCGACCCTGTTTGTCCT
GATCTGGTCGGGATACGGCCTGTTGCACTATGGCAGTCTCGATTTTATCGCGTGGGTGGCCGTTTTACTGCTGGGCAGCG
GAATGGCCGAAGCCGTAATGCCAATGATGATGCTCAATAACCTGGTCGCGCAAACGCGTTTAAGCATTCAGCGTATTTAT
CAGGTTCTCGCGATGCCGGAGTTATCGCTGCCGCAGTCTGACCAGCAGCCGCAAGAGGCGAGCATTACCTTTGAGCAGGT
GAGCTTTCATTATCCGCAAGCGCGTACTGGCGCCGCGTTGCAGGAGGTGAGCTTTCATGTGCCTGCCGGGCAAATTGTGG
CGCTGGTCGGGCCAAGCGGCGCCGGAAAAAGCACCGTAGCGCGCTTGTTGCTGCGTTACGCCGACCCGGACAAAGGCCAT
ATCCGTATTGGCGGCGTGGATCTGCGCGATATGCAGACGGACACCCTGATGAAGCAACTCTCATTTGTGTTTCAGGACAA
CTTCCTTTTTGCCGACATGATAGCCAATAACATTCGTCTGGGCGCGCCGGATACGCCGCTGGAGGCGGTAATAGCGGCGG
CCAGAGTGGCGCAGGCCCATGATTTTATTAGCGCGCTGCCAGAAGGTTACAACACGCGAGTCGGGGAACGTGGGGTATTT
CTCTCCGGCGGCCAGCGGCAGCGCATCACTATCGCCAGGGCGATTTTGCAGGATCGTCCCATCCTGGTGCTCGATGAGGC
GACGGCGTTTGCTGACCCGGAAAACGAAGCGGCGCTTATCAAGGCGCTCGCGGCGGCCATGCGCGGCCGGACGGTCATCA
TGGTCGCGCATCGTCTCTCAATGGTGACTCAGGCCGATGTGATATTGCTGTTTTCCGACGGACAGCTCAGGGAAATGGGG
AACCATACGCAACTGTTGGCGCAGGGTGGCCTGTATCAACGGCTCTGGCAACACTATCAGCAGGCGCAGCATTGGGTGCC
GGGTGGAACACAGGAAGAGGTGGTGGAAAATGAAAGACAATAA

Protein sequence :
MSSQSSNTESMSRFPLWQVIKPVRRKVILAMALAGLAALTSLGALLFLAWSLRDIRATPDTIPVWPLGGVIGCVVLTFVL
RLQAFNTSHYAAFHLENILRSRLARKALQLPPGVLQQMGSGSVAKVMLDDVKSLHIFVADSTPLYARAIIMPLATIVILF
WLDWRLAIATLGVLAFGSVVLVLARQRSEDMAQRYHKAREQVSAAVIEFVQAMPVVRTFDSGSTSFLRYQRALEEWVDVL
KTWYRKAGFSARFSFSILNPLPTLFVLIWSGYGLLHYGSLDFIAWVAVLLLGSGMAEAVMPMMMLNNLVAQTRLSIQRIY
QVLAMPELSLPQSDQQPQEASITFEQVSFHYPQARTGAALQEVSFHVPAGQIVALVGPSGAGKSTVARLLLRYADPDKGH
IRIGGVDLRDMQTDTLMKQLSFVFQDNFLFADMIANNIRLGAPDTPLEAVIAAARVAQAHDFISALPEGYNTRVGERGVF
LSGGQRQRITIARAILQDRPILVLDEATAFADPENEAALIKALAAAMRGRTVIMVAHRLSMVTQADVILLFSDGQLREMG
NHTQLLAQGGLYQRLWQHYQQAQHWVPGGTQEEVVENERQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp6 YP_001006813.1 lipoprotein inner membrane ABC-transporter Not tested HPI Protein 0.0 100
ybtP YP_070126.1 lipoprotein inner membrane ABC-transporter Virulence HPI Protein 0.0 99
irp6 YP_002346904.1 lipoprotein inner membrane ABC transporter Not tested HPI Protein 0.0 99
ybtP CAA21388.1 - Virulence HPI Protein 0.0 99
ybtP YP_853073.1 inner membrane ABC-transporter Not tested PAI IV APEC-O1 Protein 0.0 99
ybtP NP_669704.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 0.0 99
ybtP NP_993009.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 0.0 99
irp6 CAB46573.1 lipoprotein inner membrane ABC-transporter, Irp6 Virulence HPI Protein 0.0 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
irp6 YP_001006813.1 lipoprotein inner membrane ABC-transporter BAC0432 Protein 0.0 99