Gene Information

Name : fliP (YE2547)
Accession : YP_001006751.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2740503 - 2741189 bp
Length : 687 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence :
GTGGCAATGGCGCAACTGCCGGGTATTATCAGCCAACCGTTAGCCAATGGTGGGCAAAGCTGGTCTTTACCGGTACAGAC
GCTGGTCTTTATCACCACACTGAGCTTCCTTCCTGCCGCATTACTGATGATGACCAGTTTTACCCGCATCATTATTGTGC
TTGGTTTGTTGCGCAACGCATTGGGTACCCCCTCAGCGCCACCGAACCAAGTGATGCTGGGTTTGGCGCTGTTCCTGACT
TTTTTCATCATGTCGCCGGTGTTTGACAAGGTCTATCAAGATGCTTATCTGCCCTTCAGCCAGGACAAAATAAGTATGGA
AGTGGCAATGGATAAAGGCTCGCAACCGCTGCGCGAGTTTATGTTACGCCAGACCCGCGAATCTGACCTGGCACTGTATG
CCCGTTTAGCCAATCTGCCGCCACTGGAAGGGCCAGAAGTTGTGCCCTTGCGCATTCTGTTACCGGCGTATGTGACCAGT
GAGCTGAAAACCGCTTTCCAAATTGGTTTTACCGTATTTATTCCGTTTTTGATTATCGACCTGGTAGTTGCCAGTGTGCT
GATGGCTCTGGGGATGATGATGGTTCCGCCCGCCAGTATCTCGCTGCCCTTTAAACTCATGCTGTTTGTGTTGGTTGATG
GTTGGCAACTGTTACTGGGTTCTCTGGCACAAAGCTTTTACAGCTAA

Protein sequence :
MAMAQLPGIISQPLANGGQSWSLPVQTLVFITTLSFLPAALLMMTSFTRIIIVLGLLRNALGTPSAPPNQVMLGLALFLT
FFIMSPVFDKVYQDAYLPFSQDKISMEVAMDKGSQPLREFMLRQTRESDLALYARLANLPPLEGPEVVPLRILLPAYVTS
ELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASISLPFKLMLFVLVDGWQLLLGSLAQSFYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 2e-25 44
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 2e-25 44
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 2e-25 44
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 5e-27 43
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 3e-31 41
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 1e-30 41
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-27 41
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_001006751.1 flagellar biosynthesis protein FliP VFG2338 Protein 3e-95 100
fliP YP_001006751.1 flagellar biosynthesis protein FliP VFG2494 Protein 2e-68 68
fliP YP_001006751.1 flagellar biosynthesis protein FliP VFG1259 Protein 7e-58 58
fliP YP_001006751.1 flagellar biosynthesis protein FliP VFG2016 Protein 2e-57 55
fliP YP_001006751.1 flagellar biosynthesis protein FliP VFG0188 Protein 3e-29 42