Gene Information

Name : YE1898 (YE1898)
Accession : YP_001006160.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Virulence
Product : chelated iron transport system membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 2084138 - 2085022 bp
Length : 885 bp
Strand : -
Note : -

DNA sequence : 
ATGCTGGAAATCTTACTGCAACCCTTTAACTACAATTACATGGTCAAGGCCATTTGGGTCAGCGCGATTGTTGGTGCCGT
CTGTGCTTTCTTATCCGCTTATTTAATGCTGAAAGGCTGGTCGCTGATGGGGGATGCGCTCTCTCACTCCGTGGTACCCG
GCGTCGCTGGCGCGTATGCCCTCGGCCTGCCCTATGCAGCAGGGGCATTCTTTACCGGTATGCTCGCCGCATTGGCAATG
ACTTTAGTGCGCCACATCACTCGCCTGCGTGAAGATGCCATTATCGGTTTTATCTTCTCCACCTTTTTTGCCATCGGGCT
GCTCATTGTTTCGCTCAATCCCACCTCGGTCAATGTGCAGTCGATCATTTTCGGCAATATTTTGGGCATCGCCGATGAAG
ATGTGCTGCAAGTCGAAATCATTATTTTGATCTCTTTTGTGATTTTGTGTCTGATTTGGAAAGATTTACTGGCAGTGTTT
TTCGATGAAAGTCATGCCATGTCAATTGGTTTGTCACCACTGCGCTTAAAGATTTTATTCTTCACCTTATTAAGTGCTTG
TACGGTGGCGGCGTTGCAAACTGTCGGGGCGATTCTGGTAATTGCTATGGTCGTCACACCGGGTGCCACCGCCTACTTGC
TGACAGACCGTTTCAGCCGTTTGCTGGTGATAGCGATTGCCATCGGCGCATTTACCAGCGCCTTTGGTGCCTATCTCAGT
TTCTATCTTGATGGTGCAACAGGTGGAGTTATCGTCACCTTACAAACCGTCGTGTTCCTACTGGCCTTTTTCTTCGCCCC
CAAACACGGTTTATTGGCGACGCGCTATCAATCGCGTCAGAAGCGCCGTCACCCTGCGGCCTCTCACCCGGAGGATAATG
CATGA

Protein sequence : 
MLEILLQPFNYNYMVKAIWVSAIVGAVCAFLSAYLMLKGWSLMGDALSHSVVPGVAGAYALGLPYAAGAFFTGMLAALAM
TLVRHITRLREDAIIGFIFSTFFAIGLLIVSLNPTSVNVQSIIFGNILGIADEDVLQVEIIILISFVILCLIWKDLLAVF
FDESHAMSIGLSPLRLKILFFTLLSACTVAALQTVGAILVIAMVVTPGATAYLLTDRFSRLLVIAIAIGAFTSAFGAYLS
FYLDGATGGVIVTLQTVVFLLAFFFAPKHGLLATRYQSRQKRRHPAASHPEDNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-74 65
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-75 65
sitC NP_461784.1 permease Virulence SPI-1 Protein 9e-75 65
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 7e-75 65
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-74 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE1898 YP_001006160.1 chelated iron transport system membrane protein BAC0441 Protein 1e-112 95
YE1898 YP_001006160.1 chelated iron transport system membrane protein BAC0351 Protein 4e-75 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE1898 YP_001006160.1 chelated iron transport system membrane protein VFG0527 Protein 4e-75 65