Gene Information

Name : YE1897 (YE1897)
Accession : YP_001006159.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Virulence
Product : chelated iron transport system membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 2083254 - 2084141 bp
Length : 888 bp
Strand : -
Note : -

DNA sequence : 
ATGAACACATTGTTCAGTCTGGTGAGCGAACCGTTCGCCTATCCTTTTATGCAACGGGCGATAGTCGCCGCGATTATCAC
CGGTGTGGTGTGCGCGGTGTTATCTTGCTACCTGGTATTAAAAGGTTGGTCATTAATGGGAGATGCCATCTCTCACGCCG
TGTTACCGGGCATAGTGTTGGCCTTTTGGCTCGGTATCCCATTGGTTATCGGTGCTTTTGTCTCGGGGATCTTTTGTGCG
GTCGCCACGGGCTACTTAAAAGAAAACAGTCGGGTTAAAGAAGATACCGTTATGGGGATTGTCTTCTCTGGCATGTTCGC
TTTCGGCCTGGTGCTATTTTCTCGCATGGATACCGATCAGCACCTGAGCCATATTTTGTTCGGTAATATGCTGGGTATTT
CGCTAGCGGAACTGAAGCAAACGCTGTGGATCGCCGGCTTCACATTGTTAGTTGTGCTATTAAAACGTAAAGACTTCATG
CTGTACTGTTTTGACCCAAACCATGCCCGCGTCATTGGGTTACCGGTTAAGTTATTGCACTATGGTTTACTCTGTTTGCT
GGCATTAACTATCGTGGCTTCATTACAGGCGGTGGGGGTTATTTTAGTTATCGCTATGTTGATAGCACCCGGCATTATCG
CCTTTATGGTTTGTCGCAGTTTTGATCAAATGTTAGTTGTAGCTACTGTCGTTTCGGTGGTCGCGTGCGTATTAGGCACC
TTAATAAGCTTCCATATTGATGGCGCTACGGGGCCTTGCATTGTCATTATTCAGGCACTGTTCTTTGTTATTGCGCTTAT
TTATAACCATATGACTAAAGGCCATCCAATAGCCTTAAAGGTCAAAGATGATAGTGTTAAAAACGCACCAAAAGGTAAGC
TGCTATAA

Protein sequence : 
MNTLFSLVSEPFAYPFMQRAIVAAIITGVVCAVLSCYLVLKGWSLMGDAISHAVLPGIVLAFWLGIPLVIGAFVSGIFCA
VATGYLKENSRVKEDTVMGIVFSGMFAFGLVLFSRMDTDQHLSHILFGNMLGISLAELKQTLWIAGFTLLVVLLKRKDFM
LYCFDPNHARVIGLPVKLLHYGLLCLLALTIVASLQAVGVILVIAMLIAPGIIAFMVCRSFDQMLVVATVVSVVACVLGT
LISFHIDGATGPCIVIIQALFFVIALIYNHMTKGHPIALKVKDDSVKNAPKGKLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-56 55
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-56 55
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-56 55
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-56 55
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-56 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE1897 YP_001006159.1 chelated iron transport system membrane protein BAC0442 Protein 1e-109 90
YE1897 YP_001006159.1 chelated iron transport system membrane protein BAC0352 Protein 1e-56 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE1897 YP_001006159.1 chelated iron transport system membrane protein VFG0528 Protein 9e-57 55