Gene Information

Name : trp1400A (YE1822)
Accession : YP_001006092.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Unknown
Product : IS1400 transposase A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2008650 - 2008937 bp
Length : 288 bp
Strand : +
Note : Previously sequenced as Yersinia enterocolitica IS1400 transposase A Trp1400A SWALL:Q9X9H8 (EMBL:AJ132945) (96 aa) fasta scores: E(): 5e-31, 95.78 38d in 95 aa. Also similar to many others e.g. Yersinia pestis IS1400 transposase a Trp1400a or Ypo2640 SWAL

DNA sequence :
ATGTCCCCTGAGGAGATCGCTATGCGTAAAATCCGATTCACCGAGCACCAGATCATCGCCGTACTGAAATCAGTCGAAGC
GGGTAGGACCTTCAAAGATGTGTGCCGCGAGGCTGCTATTTCCGAAGCCAGCTATTACAACTGGAAGGCTAAGTATGGCG
GGATGGAAGCGGCTGATATTAAAAAAATCAAAGACCTTGAAGATGAGAACCGACGTCTCAAACAGATGTTTGCTGACCTG
AGTCTGGAAAATCGCGCGTTAAAAGACGTCATTGAAAAAAAGCTTTAA

Protein sequence :
MSPEEIAMRKIRFTEHQIIAVLKSVEAGRTFKDVCREAAISEASYYNWKAKYGGMEAADIKKIKDLEDENRRLKQMFADL
SLENRALKDVIEKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 2e-36 96
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 2e-16 52
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 2e-16 52
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 4e-16 51
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 4e-16 51
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-19 50
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 1e-19 50