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Name : gpQ (YE1679) Accession : YP_001005966.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Unknown Product : putative portal vertex protein Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 1875147 - 1876187 bp Length : 1041 bp Strand : + Note : Similar to Bacteriophage P2 presumed portal vertex protein Q SWALL:VPQ_BPP2 (SWALL:P25480) (344 aa) fasta scores: E(): 5e-70, 52.52 38d in 337 aa and Salmonella typhi probable capsid portal protein Sty4628 SWALL:Q8Z1E6 (EMBL:AL627283) (348 aa) fasta score DNA sequence : GTGGAAATAAATACAACGTTACCCGCCGCAGTCACGACGGATGCACCGCCAGCCCAGCAGCCCATCTCGATGATGGAGTC TTTCACTTTTGGCGACCCGACACCGGTATTGGATCAGCGGGATTTGCTCGATTGTATGGAGTGCGCCCGCAATGGCGATT GGTACGAGACGCCGATCAGCTTCTACGGGCTGGCCCGCATCTTTCACTCGGCCATTCACCACCAGTCACCACTCAATTTT AAACGCCGTGTGTTGATGAGTTGCTACCGGCCGCACCCGTTACTGTCCCGCGCTGATGCCGGGGCATTCGTGCAGGATTT TCTGGTGTTCGGCAATGCCTATCTTGAATTGCGCAAAAATCGACTGGGGGGCCCGTTGGCGCTGAAGCATGTTCCGGCCA AGTATATGCGGCGCGGGAGCAATCTGGATCAGTATTGGTTTGTGACTTACGAGAAAGAGGATTACCCCTTTGCGCCTGGC TCGGTGTTTCATCTGGCCGAGCCGGACATTCATCAGGAAATTTACGGTTTGCCGGGGTATCTGGCGGCCATCCCGTCGGC GTTGCTCAATGAGGACGCTACGCTGTTCCGGCGCAAGTATTACATTAACGGCAGTCATGCTGGGGTGATTGTCTATCTGT CTGACGCCATGCAAAACGATACCGATGTGCAGGCGCTAAAGCGTACGCTGACCGACGCCAGAGGGAAAGGGGCATTCAAG AACGTATTCGTGTACGCGGCGGGCGGGAAGAAAGACGGCCTGCAAATCATGCCCTTCAGCGAGATAACCGCCAAGGATGA GTTTAACGGTATCAAGAACGTAACCCGCGATGATTTGCTGGCCGCGCACCGTGTGCCGCCACAGCTGATGGGGATCATGC CGACCAATACCAGCGGCTTTGGGGATGTTGAGAAGGCGGCTAAGGTGTTCGCCATCAACGAACTGTACCCCATCATGGAA GATCTAAAAGCTCTGAATGACTGGCTGGGCGTGGACGTATTCCAGTTTAACCCCTACGCACTGGCCGAAGTTAAAGCCTG A Protein sequence : MEINTTLPAAVTTDAPPAQQPISMMESFTFGDPTPVLDQRDLLDCMECARNGDWYETPISFYGLARIFHSAIHHQSPLNF KRRVLMSCYRPHPLLSRADAGAFVQDFLVFGNAYLELRKNRLGGPLALKHVPAKYMRRGSNLDQYWFVTYEKEDYPFAPG SVFHLAEPDIHQEIYGLPGYLAAIPSALLNEDATLFRRKYYINGSHAGVIVYLSDAMQNDTDVQALKRTLTDARGKGAFK NVFVYAAGGKKDGLQIMPFSEITAKDEFNGIKNVTRDDLLAAHRVPPQLMGIMPTNTSGFGDVEKAAKVFAINELYPIME DLKALNDWLGVDVFQFNPYALAEVKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 4e-106 | 58 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 4e-106 | 58 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 3e-77 | 53 |
