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Name : myfC (YE1454) Accession : YP_001005762.1 Strain : Yersinia enterocolitica 8081 Genome accession: NC_008800 Putative virulence/resistance : Virulence Product : outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 1631151 - 1633487 bp Length : 2337 bp Strand : + Note : - DNA sequence : GTGGATATTTTCTTAGGTGATGAAAAAGTGGATTCCACTAATGTGACATTCCATGCAGTAAAATCTCCGACTGGAGAATA TTCGCTGCAGTCGTGTTTAACTAAAGAGCAATTATCCCGCTATGGCGTGGATGTGGATAATTACCCTGAGTTATTGCCAC CAGAAAAAAATATTCAGCAGGATAAGCAAGCAAGCCAATGTGTTAATTTGGCGGCAATTCCACAGGCCAGTGAAGAGTTT GAGTTTTATGCTATGCGGCTGGTGCTGAATATTCCGCAAGTGGCGTTACGGCCTAAGGATGAAATACCTGTCGAGCGTTG GGATGATGGTATTACTGCTTTTTTGCTGAATTATATGGCCAATAGCAGTACCACAACCTATCGGCAAACGGGTGAGCAGC GAAGTTCGCACTATGTTCAGTTGTATCCCGGCTTCAATATCGGGGCATGGCGTATTCGTAATGCCACCAGTTGGAATCAA TCGGGTAATAGCGCTGGCAAGTGGCAAAGCAGCTATATCTATGCCACACGCGGACTTTATCGCTTAAAGAGTCGTGTCAC ATTAGGGCAAAGTTACACACCCGGTGACTTTTTCGATAGCATGCCCTTTAGTGGCGTGATGTTGGGCGATGATGACAATA TGTTGCCGAGTCGTCAGCGCGACTTTATACCGGTAGTGCGCGGTATTGCCCGTAGCCAGGCGCGAGTAGAAGTGCGGCAA AATGGCTACCTGCTCTACAGCACCGTGGTGTCACCGGGGCCTTTTAAGTTAACTGATATGCTGCCAAGTCACTCAAACGG TGATTTGCATGTGACGGTGTTGGAAAGTAACGGCACAACGCAGCAGTTTACCGTGCCTTATAGCGTACCGGCGATAGCGC TACGCAAGGGGCGTTTGCGCTACAACCTGATGGCAGGGCGCTATCGCCCAGCTAATGTGGATGTGGAAACCACTCCCATC GCACAGGCCACAGTCGCCTATGGTTTGCCGTGGAATCTGACCGCCTTTGTCGGCGGGCAATGGTCGCCGCACTATCAGGC CACCACGGCTGGGATGGGGGTGATGCTGGGGGATTATGGGGCATTATCATCCAGCATTACCCAAGCTACCAGTGAATATC GGCAGCAGCAGCCGGTGAAAGGGCAAGTATGGGAAGTGCGCTATAACAAAACGTTGCAAGCATCGGATACTTCATTTTCA GTGGTAAATAGCCAATATAGCACCGCTGATTTCAGTAATTTATCCGATGTGTTGCAGAGTTATCGGCGTCATGATTACAG CCGCAGGGATTGGCACTCAAACTCACTGCGCCACCAAATCCATGTGGTGGTTGGGCAACCCTTGGGTCAGTTTGGTTATC TGAACCTAAATTGGTCGCGCCAGAGTTATCGTGATGCACCAGCGAGCAGTTCGTGGGGCGTTCGGTATAGCTTCAATATC GGTAATTTATATTGGTCACTGGATTGGACACAAAATCAGTATCGCGGTAATCAGGATCGCCTGTTGAGTTTGTCGGTGAG TATGCCGTTAGGTCGTGATCACGACACTTATGCGGCTTACCGCATGACGTCATCTGCTAACAGCAAAGATCACGAACTGA GCTTGTATGGCCATGCTTTCGATAATCGGCTGAGCTGGAATGTGCGCCAGACAGAGCATTATGCTCAATTTCACTCCGGT GAAAATAGTGGCTCACTTGGTTTGGATTGGCACGGTTCTTACGGCGATATTGGCGGAGATTATTACTATACTCCGACGAT GCGCCAGTGCAGTGCCAATGTGTCCGGCGGGGCAGTTATCCACCGGCATGGGCTGACACTTGGGCCGCAGATCAATGGCA CCGCCGCACTGATTGAAGTGCCGGGGGTGAGCGGAGTGTCTACCAGCGAAGACCATCGGCTGAAAACGGATTTTCGTGGT TACAGTATCGTACCAAGTATCTTCCCTTATCAGGAACATGATATCTCGCTGGAAACCACCGATTTACCACCGGATGCCGA GGTGACAAACACCGATGCCAAGGTGCTGCCGACCGAAGGGGCGATAGTGCGCGCCAGCTTCAGCCCACAAATCGGGGCGC GGGCACTGATGACCATCACCCGCAATAATGGCGAAACCATTCCGTTTGGTGCGATGGCCAGTTTGGTTAATCAGCCCGCT AATGCGGCGATTGTCGACGAAGGCGGGAAAGCCTATCTGACTGGCTTGCCGGAAACCGGGCAGTTGTTGGTGCAGTGGGG TAGGGATGCCAGCCAACAGTGTCGGGTGGATTACCAGCTTGCGAGCGCGAAAAAAGGTGACGCCGGGCTATATATGCTCA GCGGAGTGTGTCATTAA Protein sequence : MDIFLGDEKVDSTNVTFHAVKSPTGEYSLQSCLTKEQLSRYGVDVDNYPELLPPEKNIQQDKQASQCVNLAAIPQASEEF EFYAMRLVLNIPQVALRPKDEIPVERWDDGITAFLLNYMANSSTTTYRQTGEQRSSHYVQLYPGFNIGAWRIRNATSWNQ SGNSAGKWQSSYIYATRGLYRLKSRVTLGQSYTPGDFFDSMPFSGVMLGDDDNMLPSRQRDFIPVVRGIARSQARVEVRQ NGYLLYSTVVSPGPFKLTDMLPSHSNGDLHVTVLESNGTTQQFTVPYSVPAIALRKGRLRYNLMAGRYRPANVDVETTPI AQATVAYGLPWNLTAFVGGQWSPHYQATTAGMGVMLGDYGALSSSITQATSEYRQQQPVKGQVWEVRYNKTLQASDTSFS VVNSQYSTADFSNLSDVLQSYRRHDYSRRDWHSNSLRHQIHVVVGQPLGQFGYLNLNWSRQSYRDAPASSSWGVRYSFNI GNLYWSLDWTQNQYRGNQDRLLSLSVSMPLGRDHDTYAAYRMTSSANSKDHELSLYGHAFDNRLSWNVRQTEHYAQFHSG ENSGSLGLDWHGSYGDIGGDYYYTPTMRQCSANVSGGAVIHRHGLTLGPQINGTAALIEVPGVSGVSTSEDHRLKTDFRG YSIVPSIFPYQEHDISLETTDLPPDAEVTNTDAKVLPTEGAIVRASFSPQIGARALMTITRNNGETIPFGAMASLVNQPA NAAIVDEGGKAYLTGLPETGQLLVQWGRDASQQCRVDYQLASAKKGDAGLYMLSGVCH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| safC | NP_454907.1 | outer-membrane fimbrial usher protein | Not tested | SPI-6 | Protein | 1e-163 | 47 |
| afaC | AAD44022.2 | AfaC | Virulence | PAI-I AL862 | Protein | 2e-150 | 43 |
| afaC | ADD91743.1 | putative AfaC-VIII usher protein | Not tested | PAI-I AL862 | Protein | 2e-152 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| myfC | YP_001005762.1 | outer membrane usher protein | VFG0853 | Protein | 1e-150 | 45 |
| myfC | YP_001005762.1 | outer membrane usher protein | VFG0944 | Protein | 2e-150 | 44 |
| myfC | YP_001005762.1 | outer membrane usher protein | VFG0849 | Protein | 1e-136 | 41 |
| myfC | YP_001005762.1 | outer membrane usher protein | VFG0857 | Protein | 2e-138 | 41 |
