Gene Information

Name : trp1400B (YE1122)
Accession : YP_001005450.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Unknown
Product : IS1400 transposase B
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1261887 - 1262681 bp
Length : 795 bp
Strand : -
Note : Previously sequenced as Yersinia enterocolitica IS1400 transposase B Trp1400B SWALL:Q9X9H9 (EMBL:AJ132945) (294 aa) fasta scores: E(): 6.8e-120, 98.98 38d in 264 aa. Also similar to many others e.g. Yersinia pestis putative transposase Ypcd1.94 SWALL:Q9RI

DNA sequence : 
ATGAGCATACGCCAGGCATGCAGGACGTTATCGCTGAGCAGGACGGTGTTTCGTTATCAACCGAATACACGACGTGATGA
ACCGGTGATCCAGAGGCTGACTGAGGCGGCTGAACGCTATCCCCGCTACGGATTTAAGAAGCTTTTTCAGGTGCTTCGCA
GGCAGGGACACGCCTGGAACCACAAGCGTGTACACCGGATTTACTGTCTGCTAAAACTGAATTTTCGTCGTAAAGGGAAA
CAACGCCTGCCGGTGCGTAATCCGGCTCCGCTGGCCACGCCGGAAGCCCTCAACCAAAGTTGGTCGATTGATTTTATGCA
CGACGCGCTGACATGTGGCCGACGTTTTCGGACTTTCAACGTCGTGGATGATTTTAACCGCGAGGCTCTGGCTATCGAAA
TTGACCTGAATATCCCGGCGCAGCGCGTTGTGCGGGTGCTGGACAGAATAGTGGCAAACCGTGGCTATCCGCTGAAAATG
CGGATGGATAACGGGCCAGAACTAATATCACTGGCGCTGGCACAATGGGCTGAAGACCATGGCGTGATGCTGGAATTTAT
CAAGCCCGGCAAACCGACGCAAAACGCATTTATCGAACGGTTTAACCGAACGTATCGGACCGAAATACTGGATTTTTATC
TGTTCAGAACGCTGAATGAAGCTCGGGAAATAACGGAACGCTGGCTGAATGAATACAACAGTGAGCGGCCCCATGAATCC
CTGAATAACCTGACGCCGGAAGAGTACCGGCTGATGGGTGAAAAACTGGAAATCTCAAAAAGTGTGTGGAACTAA

Protein sequence : 
MSIRQACRTLSLSRTVFRYQPNTRRDEPVIQRLTEAAERYPRYGFKKLFQVLRRQGHAWNHKRVHRIYCLLKLNFRRKGK
QRLPVRNPAPLATPEALNQSWSIDFMHDALTCGRRFRTFNVVDDFNREALAIEIDLNIPAQRVVRVLDRIVANRGYPLKM
RMDNGPELISLALAQWAEDHGVMLEFIKPGKPTQNAFIERFNRTYRTEILDFYLFRTLNEAREITERWLNEYNSERPHES
LNNLTPEEYRLMGEKLEISKSVWN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 2e-121 99
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 1e-34 45
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 2e-44 43