Gene Information

Name : YE1113 (YE1113)
Accession : YP_001005442.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Virulence
Product : putative fimbrial chaperone protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 1248296 - 1248976 bp
Length : 681 bp
Strand : -
Note : Similar to Salmonella typhimurium chaperone protein LpfB precursor or Stm3639 SWALL:LPFB_SALTY (SWALL:P43661) (232 aa) fasta scores: E(): 7.8e-35, 46.9 38d in 226 aa and to Escherichia coli O157:H7 putative fimbrial chaperone Z4969 or Ecs4430 SWALL:Q8X5K6

DNA sequence : 
ATGCCGTGGTTAAAATCGTTATTCTTTATCGCCTGTTTAACCGGCGTGATGCAGTCAGCTCAGGCCGGTGTTGCTATCGG
CGGCACCCGCGTTATTTATGACGGGGCCAAAAAAGAAGCCACTTTATCCGTTAACAATCAGGATAAAAACACCCCTTATT
TAATTCAAAGCTGGGTCGATAATATCGAGGCCACCAATCATAATAAAGTGCCCTTTATTATCACCCCGCCGTTATTCCGT
TTAGATGGCGGGCAGGAAAGTAACCTGCGTATTTTATTAGCTGGCGGCAATTTGCCGCAAGACCGCGAATCGGTGCATTG
GCTGAATGTCAAAACCATTCCATCCAGTAAAAAAACTGATGGCAACCAGTTATTTATCTCGATTAAAAACCGCATCAAAT
TATTTTACCGCCCGGCAGGGCTAGCCGGTAACGCGGCTGATGCTTATAAAGCGCTGAGCTTCTCGCGCCACGGTAAGCAA
TTGCAAGTGAGCAACCCCACCGCCTATTACGTCTCCTTCCATACCCTGAAAGTGGGTGGCAGTGAGATCAAAGGCGCGCT
GATGGTTGCCCCCAAAGGCACCCTGAATATTGACCTCCCAGCGGGTGCTGCCGGTGTCGTGAGCTGGCAGGCGATTAATG
ATTTTGGCGGCACTTCCGATGTTGCCACTGCCACCTTATAA

Protein sequence : 
MPWLKSLFFIACLTGVMQSAQAGVAIGGTRVIYDGAKKEATLSVNNQDKNTPYLIQSWVDNIEATNHNKVPFIITPPLFR
LDGGQESNLRILLAGGNLPQDRESVHWLNVKTIPSSKKTDGNQLFISIKNRIKLFYRPAGLAGNAADAYKALSFSRHGKQ
LQVSNPTAYYVSFHTLKVGGSEIKGALMVAPKGTLNIDLPAGAAGVVSWQAINDFGGTSDVATATL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
phfC AAO17171.1 PhfC Virulence tcd island Protein 9e-42 47
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 4e-40 44
lpfB YP_006098366.1 fimbrial chaperone protein Not tested Tn2411 Protein 5e-34 43
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE1113 YP_001005442.1 putative fimbrial chaperone protein VFG0455 Protein 9e-45 46
YE1113 YP_001005442.1 putative fimbrial chaperone protein VFG0445 Protein 1e-42 44
YE1113 YP_001005442.1 putative fimbrial chaperone protein VFG0875 Protein 2e-40 44
YE1113 YP_001005442.1 putative fimbrial chaperone protein VFG0911 Protein 2e-38 41
YE1113 YP_001005442.1 putative fimbrial chaperone protein VFG1644 Protein 2e-38 41