Gene Information

Name : tnp (YE1001)
Accession : YP_001005334.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Unknown
Product : transposase for IS1541
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 1122080 - 1122538 bp
Length : 459 bp
Strand : +
Note : Previously sequenced as Yersinia enterocolitica IS1541 element transposase Tnp SWALL:Q9X9G7 (EMBL:AJ238016) (152 aa) fasta scores: E(): 1.2e-66, 100 id in 152 aa. Also similar to many other IS200-like transposases e.g. Salmonella typhimurium, and Salmonel

DNA sequence :
ATGGGGGACGAAAAGAGCTTAGCGCACACCCGATGGAACTGTAAATATCACATAGTTTTCGCGCCTAAATACCGAAGACA
GGTTTTCTACGGCGAGAAACGCCGGGCAGTGGGGAGTATCCTAAGAAAGCTGTGTGAATGGAAAAATGTGCACATTCTGG
AAGCGGAGTGCTGTGCAGATCACATCCATATGCTTGTGGAAATCCCGCCGAAGATGAGCGTATCAAGCTTCATGGGGTAT
CTGAAGGGCAAAAGTAGCCTGATGTTGTATGAGCAATTTGGAGATTTGAAATTCAAATACAGGAACAGAGAGTTTTGGTG
CAGAGGGTATTATGTGGATACGGTGGGTAAAAATACCTCGAAGATCCGGGACTACATAAAGCACCAACTGGAGCAGGATA
AACTGGGGGAACAACTATCAATTCCGTACCCCGGTAGCCCGTTTACGGGCAGTAAGTAA

Protein sequence :
MGDEKSLAHTRWNCKYHIVFAPKYRRQVFYGEKRRAVGSILRKLCEWKNVHILEAECCADHIHMLVEIPPKMSVSSFMGY
LKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTSKIRDYIKHQLEQDKLGEQLSIPYPGSPFTGSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 6e-67 95
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 2e-43 65
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 3e-47 62
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 5e-33 55
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 7e-33 55