Gene Information

Name : YE0993 (YE0993)
Accession : YP_001005326.1
Strain : Yersinia enterocolitica 8081
Genome accession: NC_008800
Putative virulence/resistance : Unknown
Product : putative prophage integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 1114774 - 1116003 bp
Length : 1230 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAAAACTCGCAAAAAAACTCACGGATACTGAAATCAAAAGCACCAAACCTTCGGACAAAGAAATCAACTTATTTGA
CGGTGATGGCTTGATTCTACGAATTGCTCCCCTCTCTAAGGGTGGCAAGAAAAACTGGTATTTCAGGTATGCAGTGCCAG
TGACTAAAAAGCGCACAAAAATGAGTCTTGGGACCTATCCGCACCTTACATTGGCAAGATCAAGAGCTTTACGTGATGAA
TATCTATCCTTGCTTGCCAACGGCATCGATCCACAAGTCCATAACAGCTATAAAGCTAATGCATTAAAGGATGCTACTGA
ACATACGCTACAAGCCGTTGCTCGGAAGTGGTTAGATGAGAAGGTAAAGACCTCTGGCATCTCAAAAGACCATGCCGAAG
ATATCTGGCGTAGCCTTGAACGGAACATCTTTCCCGGTCTAGGGAACGTCCCAATCAAAGAAATACGCCCTAAGCTACTA
AAGCAGCATCTTGATCCTATTGAGCAGCGTGGTGTTCTGGAAACCCTACGGCGAATTATTTCACGACTAAATGAAATTTT
CCGCTATGCAGCTACTGAGGAACTCATTGAGTTCAACCCTGCTGACAATCTCGGTCAGCGTTTCAGTAAGCCCAAAAAGC
AAAATATGCCTGCCCTTCCCCCCAGCGAACTGCCAAGATTTATGGCTTCCTTAGCTAATGCCTCAGTCCGTCTGGAGACA
CGTATGCTGATAGAATGGCAATTGTTGACCTGGGTTCGTCCGGGCGAAGCTGTTCGTGTCAGATGGGTGGATATAGATAT
TGATAATGGTATGTGGAACATTCCCGCAGAGTTCATGAAGATGAAAAATCCCCATAAGGTTCCACTGAGCAAAGAGGCCA
TACGAATACTCAAATCAATGGAACCAATCAGTAGGCACAGGGAGTGGATTTTCCCCAGCATAAAAGCTCCTCTTAGCCAT
ATGCATGAACAAACAGCTAATGCAGCGATCATCCGTATGGGGTTTGGTGGCGAACTGGTAGCGCACGGTATGCGTTCCAT
TGCAAGAACAGCAGCAGAAGAGTCCGGTAAGTTCAGAACCGAAGTTCTTGAAGCAGCTCTTGCCCACTCGAAAAAAGATG
AAATCATCGCAGCGTATAATCGTGCGGAGTATCTTGCTGAACGAATGGTTCTTATGCAGTGGTGGGGTGATTACGTCACT
GCTCAAAAATTTAAAGCTATTGCTGCCTGA

Protein sequence : 
MAKLAKKLTDTEIKSTKPSDKEINLFDGDGLILRIAPLSKGGKKNWYFRYAVPVTKKRTKMSLGTYPHLTLARSRALRDE
YLSLLANGIDPQVHNSYKANALKDATEHTLQAVARKWLDEKVKTSGISKDHAEDIWRSLERNIFPGLGNVPIKEIRPKLL
KQHLDPIEQRGVLETLRRIISRLNEIFRYAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFMASLANASVRLET
RMLIEWQLLTWVRPGEAVRVRWVDIDIDNGMWNIPAEFMKMKNPHKVPLSKEAIRILKSMEPISRHREWIFPSIKAPLSH
MHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRTEVLEAALAHSKKDEIIAAYNRAEYLAERMVLMQWWGDYVT
AQKFKAIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 6e-80 45
unnamed AAA82714.1 integrase Not tested VPI Protein 3e-82 45
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 4e-82 45
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 4e-82 45
int AAK20773.1 integrase Not tested VPI Protein 3e-82 45
int AAK20803.1 integrase Not tested VPI Protein 3e-82 45
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 1e-64 41
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 1e-64 41
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 5e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE0993 YP_001005326.1 putative prophage integrase VFG1092 Protein 5e-65 41