Gene Information

Name : sycT (YEP0006)
Accession : YP_001004062.1
Strain :
Genome accession: NC_008791
Putative virulence/resistance : Virulence
Product : chaperone of YopT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4320 - 4712 bp
Length : 393 bp
Strand : +
Note : Previously sequenced as Yersinia enterocolitica YopT chaperone SycT SWALL:Q93KU9 (EMBL:AF336309) (130 aa) fasta scores: E(): 5.9e-53, 100 38d in 130 aa and to Yersinia pestis yopt chaperone syct or ypcd1.21 SWALL:Q9ZGW6 (EMBL:AF074612) (132 aa) fasta scor

DNA sequence :
ATGCAGACAACCTTCACAGAACTTATGCAACAGCTTTTCCTGAAGCTTGGCTTGAACCATCAAGTTAATGAAAATGACGT
TTATACATTTGAAGTGGATGGGCACATCCAAGTACTGATTGCTTGTTATCATCAACAATGGGTACAGTTGTTCAGTGAGC
TAGGTGCTGATTTGCCAACCAACGATAATTTGTTTGGCGAACATTGGCCTGCCCATGTTCAAGGAAGGCTGGACGGTAAA
CCTATTCTCTGGTCTCAACAATCACTGGTAGGGTTGGATATCGATGAAATGCAGGCTTGGTTAGAACGTTTCATTGATGA
TATTGAGCAGAGAAAAGAATCGCAAAATACTAAGTTTCAGCCCAACTCGACATCACCCATATTATTCATCTGA

Protein sequence :
MQTTFTELMQQLFLKLGLNHQVNENDVYTFEVDGHIQVLIACYHQQWVQLFSELGADLPTNDNLFGEHWPAHVQGRLDGK
PILWSQQSLVGLDIDEMQAWLERFIDDIEQRKESQNTKFQPNSTSPILFI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18077.1 unknown Not tested TTSS locus Protein 2e-34 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sycT YP_001004062.1 chaperone of YopT VFG0376 Protein 3e-55 98