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Name : yopT (YEP0005) Accession : YP_001004061.1 Strain : Genome accession: NC_008791 Putative virulence/resistance : Virulence Product : plasmid type III secretion system effector protein Function : - COG functional category : - COG ID : - EC number : - Position : 3352 - 4320 bp Length : 969 bp Strand : + Note : Previously sequenced: Yersinia enterocolitica plasmid type III secretion system effector protein YopT or ypcd1.20 SWALL:Q93KV0 (EMBL:AF336309) (322 aa) fasta scores: E(): 8.1e-132, 100 38d in 322 aa DNA sequence : ATGGACAGTATTCACGGACACTACCATATTCAACTATCGAATTATTCTGCCGGTGAAAACCTTCAATCAGCTACACCCCC CGAAGGGGTGATTGGCGCACACCGAGTGAAAGTGGAAACAGCACTGTCACACTCAAACCGGCAGAAAAAGTTATCAGCCA CCATAAAACATAACCAGTCAAGCCGTTCTATGCTGGATAGAAAGTTGACCAGCGACGGCAAAGTTAACCAACGCAGCAGC TTTACCTTCAGTATGATTATGTATCGCATGATACATTTTGTACTCAGTACTCGTGTGCCCGCGGTGAGAGAGTCTGTTGC AAATTACGGAGGTAACATCAATTTCAAGTTTGCTCAGACCAAAGGGGCTTTTCTTCATCAAATAATAAAACATTCAGACA CCGCTAGGGGGGCCTGTGAGGCTTTATGTGCACATTGGATCAGGAGCCATGCACAGGGCCAAAGCTTATTTGACCAGCTC TATGTTGGCGGGCGTAAGGGGAAATTCCAGATCGATACACTTTACTCAATTAAACAGTTGCAAATAGATGGTTGTAAAGC AGACGTTGATCAAGATGAGGTAACACTAGATTGGCTCAAGAAAAATGGCATATCAGAACGTATGATTGAACGGCATTGCT TACTGCCTACAGTTGATGTTACTGGTACGACGGGATCGGAAGGGCCGGATCAATTATTAAACGCTATCCTTGATACTAAT GGGATAGGTTACGGTTATAAAAAAATATCTCTCTCTGGCCAAATGTCAGGCCACACCATAGCGGCGTATGTCAACGAAAA TAGTGGTGTTACTTTCTTCGATCCCAATTTCGGTGAATTCCACTTTTCTGATAAGGAAAAGTTCAGCAAATGGTTTACTA ACTCATTCTGGGAAAATTCTATGTATCATTATCCTTTGGGGGTGGGGCAGAGTTTTAGCGTTTTTACATTTGACTCCAAG GAGGTTTAA Protein sequence : MDSIHGHYHIQLSNYSAGENLQSATPPEGVIGAHRVKVETALSHSNRQKKLSATIKHNQSSRSMLDRKLTSDGKVNQRSS FTFSMIMYRMIHFVLSTRVPAVRESVANYGGNINFKFAQTKGAFLHQIIKHSDTARGACEALCAHWIRSHAQGQSLFDQL YVGGRKGKFQIDTLYSIKQLQIDGCKADVDQDEVTLDWLKKNGISERMIERHCLLPTVDVTGTTGSEGPDQLLNAILDTN GIGYGYKKISLSGQMSGHTIAAYVNENSGVTFFDPNFGEFHFSDKEKFSKWFTNSFWENSMYHYPLGVGQSFSVFTFDSK EV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18078.1 | putative type III secreted effector LopT | Not tested | TTSS locus | Protein | 9e-79 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yopT | YP_001004061.1 | plasmid type III secretion system effector protein | VFG0375 | Protein | 9e-141 | 93 |
