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Name : yscL (YEP0047) Accession : YP_001004099.1 Strain : Genome accession: NC_008791 Putative virulence/resistance : Virulence Product : type III secretion system protein Function : - COG functional category : N : Cell motility COG ID : COG1317 EC number : - Position : 34130 - 34801 bp Length : 672 bp Strand : + Note : Previously sequenced as: Yersinia enterocolitica yop proteins translocation protein L YscL SWALL:YSCL_YEREN (SWALL:Q01253) (223 aa) fasta scores: E(): 5.2e-75, 98.65 id in 223 aa. Also highly similar to Pseudomonas aeruginosa type III export protein PscL DNA sequence : ATGTCACAAACTTGTCAAACAGGTTATGCCTACATGCAGCCATTTGTTCAAATAATACCAAGTAATCTCTCGCTCGCTTG CGGTCTGCGTATTTTGCGCGCCGAAGATTACCAATCCAGTTTAACTACCGAAGAGTTGATTAGTGCCGCAAAACAGGATG CTGAAAAGATCCTGGCTGACGCCCAGGAGGTTTATGAGCAACAAAAGCAGTTAGGATGGCAGGCTGGCATGGATGAGGCG CGTACCTTACAGGCGACTTTGATTCATGAAACACAGTTACAATGTCAGCAATTTTATCGCCACGTTGAACAACAGATGAG TGAAGTTGTACTTTTGGCGGTACGTAAAATCCTCAATGACTATGATCAAGTGGATGTGACACTGCAAGTTGTGCGGGAGG CTTTAGCCTTGGTGAGTAATCAGAAGCAAGTCGTGGTCAGGGTCAACCCTGATCAGGCAGGAGCTATTCGTGAACAAATA GCTAAAGTACATAAAGACTTCCCGGAAATAAGCTATTTAGAGGTGACTGCCGATGCGCGTTTGGATCAAGGGGGCTGTAT ATTAGAGACTGAGGTAGGTATTATTGACGCGAGTATTGATGGGCAAATTGAAGCACTTTCTCGGGCAATATCTACCACTT TAGGACAAATGAAAGTTATAGAAGAGGAATAA Protein sequence : MSQTCQTGYAYMQPFVQIIPSNLSLACGLRILRAEDYQSSLTTEELISAAKQDAEKILADAQEVYEQQKQLGWQAGMDEA RTLQATLIHETQLQCQQFYRHVEQQMSEVVLLAVRKILNDYDQVDVTLQVVREALALVSNQKQVVVRVNPDQAGAIREQI AKVHKDFPEISYLEVTADARLDQGGCILETEVGIIDASIDGQIEALSRAISTTLGQMKVIEEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18079.1 | LscL | Not tested | TTSS locus | Protein | 3e-65 | 68 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yscL | YP_001004099.1 | type III secretion system protein | VFG0411 | Protein | 1e-98 | 99 |
| yscL | YP_001004099.1 | type III secretion system protein | VFG0220 | Protein | 2e-57 | 57 |
