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Name : yscK (YEP0046) Accession : YP_001004098.1 Strain : Genome accession: NC_008791 Putative virulence/resistance : Virulence Product : type III secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 33555 - 34184 bp Length : 630 bp Strand : + Note : Previously sequenced:Yersinia enterocolitica yop proteins translocation protein K YscK SWALL:YSCK_YEREN (SWALL:Q01252) (209 aa) fasta scores: E(): 2.7e-86, 99.52 id in 209 aa. Also highly similar to Yersinia pestis, and Yersinia pseudotuberculosis yop pro DNA sequence : ATGATGGAAAATTATATTACCTCTTTTCAATTGCGCTTCTGCCCCGCGGCTTATTTGCACTTGGAACAGTTACCATCATT ATGGCGTTCAATATTGCCCTACTTACCTCAGTGGCGCGATAGTGCTCATCTCAATGCTGCTTTATTGGATGAATTTTCTC TTGATACCGACTATGAAGAGCCCCATGGGCTGGGGGCGCTGCCTTTGCAGCCCCAATCACAGCTCGAACTGTTACTTTGT CGCCTTGGATTAGTTCTGCATGGGGAGGCGATTCGCCGTTGTGTACTGGCCTCCCCATTACAGCAATTATTGACATTGGT TAATCAAGAAACATTAAGGCAAATTATTGTACAGCATGAGCTGCTAATCGGGCCTTGGCCCACTCACTGGCAGCGCCCGC TGCCGACAGAAATAGAGAGCCGTACCATGATCCAGTCGGGGCTGGCTTTTTGGTTAGCAGCAATGGAACCCCAACCTCAG GCATGGTGTAAACGGCTCAGTTTACGCCTCCCATTAGCTACGCCGTCAGAACCTTGGTTAGTGGCCGAGTCACAACGCCC ACTGGCCCAAACTTTATGTCACAAACTTGTCAAACAGGTTATGCCTACATGCAGCCATTTGTTCAAATAA Protein sequence : MMENYITSFQLRFCPAAYLHLEQLPSLWRSILPYLPQWRDSAHLNAALLDEFSLDTDYEEPHGLGALPLQPQSQLELLLC RLGLVLHGEAIRRCVLASPLQQLLTLVNQETLRQIIVQHELLIGPWPTHWQRPLPTEIESRTMIQSGLAFWLAAMEPQPQ AWCKRLSLRLPLATPSEPWLVAESQRPLAQTLCHKLVKQVMPTCSHLFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscK | AAO18026.1 | LscK | Virulence | TTSS locus | Protein | 1e-39 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yscK | YP_001004098.1 | type III secretion protein | VFG0410 | Protein | 2e-82 | 99 |
| yscK | YP_001004098.1 | type III secretion protein | VFG0219 | Protein | 4e-23 | 41 |
