Gene Information

Name : yscJ (YEP0045)
Accession : YP_001004097.1
Strain :
Genome accession: NC_008791
Putative virulence/resistance : Virulence
Product : type III secretion lipoprotein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4669
EC number : -
Position : 32821 - 33555 bp
Length : 735 bp
Strand : +
Note : Previously sequenced: Yersinia enterocolitica yop proteins translocation lipoprotein J precursor YscJ or YlpB SWALL:YSCJ_YEREN (SWALL:Q01251) (244 aa) fasta scores: E(): 4.9e-87, 100 38d in 244 aa. Also highly similar to Yersinia pestis, and Yersinia pseu

DNA sequence : 
GTGAAAGTTAAGACTTCACTGTCAACATTGATATTAATCTTGTTTTTAACTGGTTGCAAAGTTGATCTTTATACCGGAAT
TAGTCAGAAGGAAGGGAACGAAATGCTCGCGCTGTTGCGCCAAGAAGGCCTTTCCGCAGACAAAGAGCCAGACAAAGATG
GGAAGATTAAGCTCTTGGTTGAGGAGTCAGATGTCGCTCAGGCTATTGATATTCTCAAACGGAAGGGCTATCCACACGAG
AGTTTCTCCACGTTACAGGATGTGTTCCCCAAAGATGGGTTGATATCTTCACCGATAGAAGAGTTGGCGAGGCTTAATTA
TGCCAAGGCGCAAGAGATCTCCCGCACTTTATCTGAAATTGACGGGGTATTAGTGGCTCGAGTGCATGTCGTATTGCCTG
AAGAGCAAAATAACAAAGGTAAGAAGGGCGTAGCAGCATCCGCTTCGGTTTTTATCAAGCACGCAGCAGATATTCAGTTT
GATACCTACATACCTCAGATTAAACAATTAGTGAATAATAGTATTGAGGGGCTGGCCTATGATCGCATCAGTGTCATTTT
GGTGCCATCGGTAGATGTTCGTCAAAGCTCTCATTTACCTCGTAACACGAGCATACTGTCAATTCAAGTGAGTGAAGAGT
CAAAAGGGCGTCTTATTGGCTTGTTGTCGTTGCTTATTTTGCTTTTGCCAGTGACCAATCTTGCTCAATATTTTTGGTTA
CAACGCAAGAAGTGA

Protein sequence : 
MKVKTSLSTLILILFLTGCKVDLYTGISQKEGNEMLALLRQEGLSADKEPDKDGKIKLLVEESDVAQAIDILKRKGYPHE
SFSTLQDVFPKDGLISSPIEELARLNYAKAQEISRTLSEIDGVLVARVHVVLPEEQNNKGKKGVAASASVFIKHAADIQF
DTYIPQIKQLVNNSIEGLAYDRISVILVPSVDVRQSSHLPRNTSILSIQVSEESKGRLIGLLSLLILLLPVTNLAQYFWL
QRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscJ AAO18027.1 LscJ Virulence TTSS locus Protein 2e-76 77
hrcJ AAB05080.1 HrcJ Virulence Hrp PAI Protein 2e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yscJ YP_001004097.1 type III secretion lipoprotein VFG0409 Protein 4e-96 99
yscJ YP_001004097.1 type III secretion lipoprotein VFG0218 Protein 8e-73 74
yscJ YP_001004097.1 type III secretion lipoprotein VFG0051 Protein 1e-31 41