Gene Information

Name : yscI (YEP0044)
Accession : YP_001004096.1
Strain :
Genome accession: NC_008791
Putative virulence/resistance : Virulence
Product : putative type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 32467 - 32814 bp
Length : 348 bp
Strand : +
Note : Previously sequenced: Yersinia enterocolitica yop proteins translocation protein I YscI SWALL:YSCI_YEREN (SWALL:Q01250) (115 aa) fasta scores: E(): 2e-40, 99.13 id in 115 aa. Also highly similar to Yersinia pestis, and Yersinia pseudotuberculosis yop prot

DNA sequence : 
ATGCCGAACATAGAAATAGCTCAGGCCGATGAGGTGATCATAACCACGCTGGAGGAATTCGGGCCGGTAGAGCCAACAAC
TGAGCAAATAATGCGCTTTGATGCGGCAATGTCAGAAGATACGCAGGGACTGGGCCATTCACTCCTCAAGGAGGTTAGTG
ATATTCAGAAGACTTTTAAGACGGCTAAAAGTGACTTGCACACTAAGCTGGCTGTTTCAGTTGATAATCCCAACGACCTG
ATGCTAATGCAATGGTCACTTATCCGTATAACAATCCAAGAAGAACTTATCGCCAAGACTGCCGGGCGAATGAGCCAAAA
TGTTGAAACCTTGTCGAAGGGGGGGTGA

Protein sequence : 
MPNIEIAQADEVIITTLEEFGPVEPTTEQIMRFDAAMSEDTQGLGHSLLKEVSDIQKTFKTAKSDLHTKLAVSVDNPNDL
MLMQWSLIRITIQEELIAKTAGRMSQNVETLSKGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscI AAO18028.1 LscI Virulence TTSS locus Protein 4e-24 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yscI YP_001004096.1 putative type III secretion protein VFG0408 Protein 7e-48 96
yscI YP_001004096.1 putative type III secretion protein VFG0217 Protein 8e-21 49