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Name : yscU (YEP0031) Accession : YP_001004085.1 Strain : Genome accession: NC_008791 Putative virulence/resistance : Virulence Product : putative type III secretion protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4792 EC number : - Position : 24291 - 25355 bp Length : 1065 bp Strand : + Note : Previously sequenced: Yersinia enterocolitica YscU SWALL:Q93KT4 (EMBL:AF336309) (354 aa) fasta scores: E(): 2.5e-130, 100 38d in 354 aa. Also highly similar to Yersinia pestis, and Yersinia pseudotuberculosis yop proteins translocation protein U YscU or Y DNA sequence : ATGAGCGGAGAAAAGACAGAGCAACCCACCCCGAAGAAAATCCGTGATGCGCGCAAAAAGGGACAGGTAGCGAAAAGTAA GGAAGTGGTCTCTACTGCGCTTATCGTCGCGCTGAGTGCGATGTTAATGGGGCTTTCTGACTACTATTTCGAGCATTTGA GTAGGCTGATGCTAATCCCCGCAGAGCAGAGCTATCTTCCTTTCTCGCAGGCGCTTAGCTATGTGGTTGACAATGTGTTG CTCGAGTTTTTTTATCTCTGTTTTCCTTTGTTAACAGTAGCGGCATTGATGGCGATCGCTTCTCATGTTGTGCAGTATGG TTTTCTTATAAGTGGTGAAGCAATTAAACCGGATATTAAAAAAATCAATCCAATAGAGGGTGCCAAGCGCATCTTTTCCA TCAAAAGTTTAGTGGAGTTTCTCAAATCCATTCTCAAGGTTGTTTTGCTCAGTATACTCATCTGGATAATCATTAAGGGA AATCTAGTCACACTCTTGCAGTTGCCAACCTGTGGAATTGAATGTATTACCCCTTTATTGGGGCAAATACTCCGGCAGTT GATGGTGATCTGTACTGTTGGCTTTGTGGTCATCTCCATAGCTGACTATGCCTTTGAATACTATCAATATATTAAGGAAC TTAAAATGAGCAAGGATGAGATCAAACGCGAGTACAAAGAAATGGAGGGTAGCCCAGAAATCAAAAGCAAGCGCCGTCAG TTTCATCAAGAGATCCAATCGGGGAACATGCGGGAAAATGTTAAACGCTCATCAGTGGTGGTAGCTAATCCGACCCATAT TGCTATTGGTATTCTTTACAAGCGAGGGGAAACACCACTACCGTTGGTAACATTCAAATATACCGATGCCCAAGTTCAGA CTGTGCGCAAAATAGCAGAAGAAGAAGGGGTGCCTATTTTACAACGTATCCCATTAGCCCGTGCTCTTTATTGGGATGCG CTCGTCGATCACTATATTCCGGCTGAGCAAATAGAGGCCACAGCTGAAGTGCTACGATGGCTAGAAAGGCAAAATATCGA GAAACAGCATTCCGAAATGTTATAA Protein sequence : MSGEKTEQPTPKKIRDARKKGQVAKSKEVVSTALIVALSAMLMGLSDYYFEHLSRLMLIPAEQSYLPFSQALSYVVDNVL LEFFYLCFPLLTVAALMAIASHVVQYGFLISGEAIKPDIKKINPIEGAKRIFSIKSLVEFLKSILKVVLLSILIWIIIKG NLVTLLQLPTCGIECITPLLGQILRQLMVICTVGFVVISIADYAFEYYQYIKELKMSKDEIKREYKEMEGSPEIKSKRRQ FHQEIQSGNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDA LVDHYIPAEQIEATAEVLRWLERQNIEKQHSEML |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscU | AAO18037.1 | LscU | Virulence | TTSS locus | Protein | 9e-116 | 73 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yscU | YP_001004085.1 | putative type III secretion protein | VFG0397 | Protein | 5e-155 | 99 |
| yscU | YP_001004085.1 | putative type III secretion protein | VFG0185 | Protein | 2e-96 | 67 |
