Gene Information

Name : yopN (YEP0023)
Accession : YP_001004077.1
Strain :
Genome accession: NC_008791
Putative virulence/resistance : Virulence
Product : type III secretion outer membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 17451 - 18332 bp
Length : 882 bp
Strand : -
Note : Previously sequenced: Yersinia enterocolitica plasmid type III secretion system outer membrane protein YopN or LcrE SWALL:YOPN_YEREN (SWALL:P16945) (292 aa) fasta scores: E(): 7.8e-96, 95.54 38d in 292 aa. Also highly similar to Yersinia pestis, and Yersi

DNA sequence : 
ATGACGACACTTCATAACATATCTTATGGCAATACCCCGCTGCGTAATGAGCATCCAGAGACTGCCAGTAGTCAGATCGT
AAATCAGACTCTGGGTCAATTTCGGGGAGAATCTGTGCAGATAGTCAGCGGCACTCTGCAGTCTATAGCTGATATGGCAG
AAGAGGTAACATTTGTCTTCTCCGAGCGTAAGGAGCTCTCCCTCGACAAACGCAAATTAAGTGACAGCCAAGCTCGAGTT
AGCGACGTTGAGGAGCAGGTTAATCAATACCTTAGCAAAGTTCCAGAGTTGGAACAAAAACAGAATGTGAGTGAGCTGCT
CAGTCTGTTGAGTAACAGCCCCAATATAAGCTTGTCCCAGTTAAAGGCTTATCTGGAGGGGAAATCAGAAGAACCGAGTG
AGCAATTCAAAATGCTCTGCGGCTTGCGTGATGCCCTGAAAGGGCGCCCTGAATTAGCACATCTTTCGCATTTGGTTGAA
CAAGCTCTGGTCAGCATGGCTGAAGAGCAAGGAGAAGCCATTGTATTGGGTGCCAGGATAACCCCGGAAGCGTACAGAGA
ATCCCAGTCGAGTGTTAATCCACTGCAGCCGCTCCGTGATACCTACCGCGATGCAGTGATGGGTTATCAAGGGATTTATG
CGATCTGGAGTGATTTACAAAAACGTTTTCCCAATGGGGATATAGACTCAGTGATATTATTCCTGCAAAAGGCGCTTAGT
GCAGATCTACAAAGTCAACAAAGCGGGTCTGGACGGGAAAAATTAGGAATTGTTATTAGTGACTTACAGAAGCTAAAGGA
GTTTGGTAGCGTGAGTGACCAGGTTAAAGGATTTTGGCAATTTTTTTCAGAGGGTATAACTAATGGCGTACGACCTTTCT
GA

Protein sequence : 
MTTLHNISYGNTPLRNEHPETASSQIVNQTLGQFRGESVQIVSGTLQSIADMAEEVTFVFSERKELSLDKRKLSDSQARV
SDVEEQVNQYLSKVPELEQKQNVSELLSLLSNSPNISLSQLKAYLEGKSEEPSEQFKMLCGLRDALKGRPELAHLSHLVE
QALVSMAEEQGEAIVLGARITPEAYRESQSSVNPLQPLRDTYRDAVMGYQGIYAIWSDLQKRFPNGDIDSVILFLQKALS
ADLQSQQSGSGREKLGIVISDLQKLKEFGSVSDQVKGFWQFFSEGITNGVRPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lopN AAO18045.1 LopN Virulence TTSS locus Protein 7e-52 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yopN YP_001004077.1 type III secretion outer membrane protein VFG0389 Protein 4e-121 98
yopN YP_001004077.1 type III secretion outer membrane protein VFG0193 Protein 1e-49 46