Gene Information

Name : yscX (YEP0020)
Accession : YP_001004074.1
Strain :
Genome accession: NC_008791
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 16469 - 16837 bp
Length : 369 bp
Strand : -
Note : Previously sequenced: Yersinia enterocolitica hypothetical protein SWALL:YLC3_YEREN (SWALL:P21208) (122 aa) fasta scores: E(): 1.8e-46, 99.18 38d in 122 aa. Also highly similar to Y. ersinia pestis and Y. enterocolitica hypothetical 13.8 kDa protein Y0045

DNA sequence : 
GTGAGTCGCATAATAACTGCCCCCCATATTGGCATCGAAAAACTGTCGGCGATTAGCCTGGAAGAGCTATCCTGTGGCTT
GCCTGAACGTTATGCCTTGCCGCCTGATGGGCATCCAGTCGAACCACATTTAGAGCGCCTTTACCCTACAGCACAAAGCA
AGCGTAGCCTATGGGACTTTGCTTCTCCCGGCTATACATTTCATGGATTACATCGAGCTCAAGATTATCGGCGCGAACTG
GATACCTTGCAGTCACTGCTAACCACCAGTCAGTCCTCAGAGCTACAAGCTGCCGCGGCGCTGCTGAAATGCCAACAAGA
TGATGATCGGTTACTGCAAATAATCCTTAACCTGTTGCACAAAGTATGA

Protein sequence : 
MSRIITAPHIGIEKLSAISLEELSCGLPERYALPPDGHPVEPHLERLYPTAQSKRSLWDFASPGYTFHGLHRAQDYRREL
DTLQSLLTTSQSSELQAAAALLKCQQDDDRLLQIILNLLHKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssB AAO18048.1 LssB Virulence TTSS locus Protein 6e-18 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yscX YP_001004074.1 hypothetical protein VFG0386 Protein 8e-39 100
yscX YP_001004074.1 hypothetical protein VFG0196 Protein 5e-14 50