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Name : yopB (YEP0013) Accession : YP_001004067.1 Strain : Genome accession: NC_008791 Putative virulence/resistance : Virulence Product : virulence plasmid YopB transmembrane effector protein Function : - COG functional category : S : Function unknown COG ID : COG5613 EC number : - Position : 10593 - 11798 bp Length : 1206 bp Strand : - Note : Previously sequenced: Yersinia enterocolitica virulence plasmid YopB transmembrane protein SWALL:YOPB_YEREN (SWALL:P37131) (401 aa) fasta scores: E(): 2.2e-121, 98.75 38d in 401 aa, and to Yersinia pseudotuberculosis YopB protein yopB SWALL:YOPB_YERPS (SW DNA sequence : ATGAGTGCGTTGATAACCCATGATCGCTCAACGCCAGTAACTGGAAGTCTACTTCCCTACGTCGAGACACCAGCGCCCGC CCCCCTTCAGACTCAACAAGTCGCGGGAGAACTGAAGGATAAAAATGGTGGGGTGAGTTCTCAGGGCGTACAGCTCCCTG CACCACTAGCAGTGGTTGCCAGCCAAGTCACTGAAGGACAACAGCAAGAAATCACTAAATTATTGGAGTCGGTCACCCGC GGCACGGCAGGATCTCAACTGATATCAAATTATGTTTCAGTGCTAACGAATTTTACGCTCGCTTCACCTGATACATTTGA GATTGAGTTAGGTAAGCTAGTTTCTAATTTAGAAGAAGTACGCAAAGACATAAAAATCGCTGATATTCAGCGTCTTCATG AACAAAACATGAAGAAAATTGAAGAGAATCAAGAGAAAATCAAAGAAACAGAAGAGAATGCCAAGCAAGTCAAGAAATCC GGCATGGCATCAAAGATTTTTGGCTGGCTCAGCGCCATAGCCTCAGTGGTTATCGGTGCCATCATGGTGGCCTCAGGGGT AGGAGCCGTTGCCGGTGCAATGATGATTGCCTCAGGCGTAATTGGGATGGCGAATATGGCTGTGAAACAAGCGGCGGAAG ATGGCCTGATATCCCAAGAGGCAATGCAAGTATTAGGGCCGATACTCACTGCGATTGAAGTCGCATTGACTGTAGTTTCA ACCGTAATGACCTTTGGCGGTTCGGCACTAAAATGCCTGGCTGATATTGGCGCAAAACTCGGTGCTAACACCGCAAGTCT TGCTGCTAAAGGAGCCGAGTTTTCGGCCAAAGTTGCCCAAATTTCGACAGGCATATCAAACACTGTCGGGAATGCAGTGA CTAAATTAGGGGGCAGTTTTGGTAGTTTAACAATGAGCCATGTAATCCGTACAGGATCACAGGCAACACAAGTCGCCGTT GGTGTGGGCAGCGGAATAACTCAGACCATCAATAATAAAAAACAAGCTGATTTACAACATAATAACGCTGATTTGGCCTT GAACAAGGCAGACATGGCAGCGTTACAAAGTATTATTGACCGACTCAAAGAAGAGTTATCCCATTTGTCAGAGTCACATC AACAAGTGATGGAACTGATTTTCCAGATGATTAATGCAAAAGGTGACATGCTGCATAATTTGGCCGGCAGACCCCATACT GTTTAA Protein sequence : MSALITHDRSTPVTGSLLPYVETPAPAPLQTQQVAGELKDKNGGVSSQGVQLPAPLAVVASQVTEGQQQEITKLLESVTR GTAGSQLISNYVSVLTNFTLASPDTFEIELGKLVSNLEEVRKDIKIADIQRLHEQNMKKIEENQEKIKETEENAKQVKKS GMASKIFGWLSAIASVVIGAIMVASGVGAVAGAMMIASGVIGMANMAVKQAAEDGLISQEAMQVLGPILTAIEVALTVVS TVMTFGGSALKCLADIGAKLGANTASLAAKGAEFSAKVAQISTGISNTVGNAVTKLGGSFGSLTMSHVIRTGSQATQVAV GVGSGITQTINNKKQADLQHNNADLALNKADMAALQSIIDRLKEELSHLSESHQQVMELIFQMINAKGDMLHNLAGRPHT V |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lopB | AAO18055.1 | LopB | Virulence | TTSS locus | Protein | 2e-41 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yopB | YP_001004067.1 | virulence plasmid YopB transmembrane effector protein | VFG0379 | Protein | 7e-158 | 97 |
| yopB | YP_001004067.1 | virulence plasmid YopB transmembrane effector protein | VFG0203 | Protein | 3e-46 | 43 |
