Gene Information

Name : Hhal_0915 (Hhal_0915)
Accession : YP_001002493.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Unknown
Product : deoxyribodipyrimidine photo-lyase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0415
EC number : 4.1.99.3
Position : 988669 - 990102 bp
Length : 1434 bp
Strand : +
Note : PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: aeh:Mlg_2256 deoxyribodipyrimidine photo-lyase

DNA sequence :
TTGACCAACGCCCTCGTCTGGCTGCGCCGGGACCTGCGCCTGGCCGATCAGCCGGCCCTGGCCCGCGCCGCACAAACCGC
GGAGCGCCTGGCCCCGGTCTACATCCACGCCCCCGCAGAGACCCGACCGACCGTAGGCGCCGCCAGTTGCTGGTGGTTGC
ACCACAGCCTGGCGGCACTGGACGCCGAGCTGGCCTCGGCCGGCAGTCGACTCTGCCTGGACACCGGCCCCAGCGCCGAG
CGCCTATGCCACTGGGCGCAGGTCAGCGACGCCGCGGTGGTCTACTGCACCGCCATCGCCGAGCCGTGGGCGCGGCAACA
GGAGGCCGCCGTGGCCGAGGCCCTGGCCGCGATCGGCGTCCGCCTGGAGGTCCTCGCCGACGGCCTGCTCACCGATCCTA
GCGCCGTACGCAACCGCAGCGGCACCCCGTACCGCGCCTTCACGCCCTTCTGGCGCAGCGTGCGGGCGCAGCTGGATCCG
CCCCGCCCCGCGCCGCCGCCGGCGTTGCCTGGCCTGCCGGAGGCCATCCCGGAGCCGCAGCCGCTGGAGACGCTGGGGCT
GCTGCCGCGCATCCGCTGGGACGAGAAGCTGGCCCCCTGCTGGCAGCCCGGCGCCGCCGGGGCCCAGCAGCGCCTGGAGC
GGTTCCTGGATGGGGCGGGGCCGGCCTACGGCGAACGGCGCGACTTCCCGGCGCAACCGGGGACCTCACGGCTGTCGCCC
CACCTGCACTTCGGCGAGATCAGCATCCGCGCCGTCTGGCACGCGGTGCGCGACGCCCAGCAGATGCAGCCGGCGGCGGC
TGACGCCCTGGACACCTTCCTCGCCGAGCTGGGCTGGCGGGAGTTCGCCTACCACCTGCTGTGGCAGCAGCCGGAACTCC
ACCGCACGCCCATCGACGAGCGCTTCAGCCGCTTCCCCTGGCGCGAGGACCCCGACGGCGCCCTGCTCGACGCCTGGCGC
CGCGGCGCCACCGGCATCCCGCTGGTGGATGCGGGCATGCGCGAGCTGTGGGCCACCGGCTGGATGCATAATCGGGTGCG
CATGGTGGTCGGCTCGTTCCTGGTCAAGAACCTGCGCCTGCCCTGGCAGCACGGTGAGGCGCACTTCCGCGATACTCTGG
TGGACTGGGACCTGGCCAGCAACAGCATGGGCTGGCAGTGGGTGAGCGGCTGCGGGGCGGACGCCGCCCCCTACTTCCGC
ATCTTCAACCCGGTGCGCCAGGGCGAGCGCTTCGACCCCGACGGCGACTACGTCCGCCACTGGGTCCCGGAGGTGGCCGG
CCTGCCCAAGAGCCACATCCACCAACCCTGGGCGGCGCCCGCCGACGCGCGGGCCCGCTGCGGCTTGCACCTGGGGCGGG
ACTATCCGGAGCCCCTGGTCGATCTGGCCACCAGCCGCAAGGAGGCGCTGGCAGCATTCCATGCCCTCGGTTAG

Protein sequence :
MTNALVWLRRDLRLADQPALARAAQTAERLAPVYIHAPAETRPTVGAASCWWLHHSLAALDAELASAGSRLCLDTGPSAE
RLCHWAQVSDAAVVYCTAIAEPWARQQEAAVAEALAAIGVRLEVLADGLLTDPSAVRNRSGTPYRAFTPFWRSVRAQLDP
PRPAPPPALPGLPEAIPEPQPLETLGLLPRIRWDEKLAPCWQPGAAGAQQRLERFLDGAGPAYGERRDFPAQPGTSRLSP
HLHFGEISIRAVWHAVRDAQQMQPAAADALDTFLAELGWREFAYHLLWQQPELHRTPIDERFSRFPWREDPDGALLDAWR
RGATGIPLVDAGMRELWATGWMHNRVRMVVGSFLVKNLRLPWQHGEAHFRDTLVDWDLASNSMGWQWVSGCGADAAPYFR
IFNPVRQGERFDPDGDYVRHWVPEVAGLPKSHIHQPWAAPADARARCGLHLGRDYPEPLVDLATSRKEALAAFHALG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CD241_0111 YP_005124380.1 putative riboflavin biosynthesis protein Not tested Not named Protein 1e-56 42
DIP0113 NP_938509.1 riboflavin biosynthesis protein Not tested Not named Protein 8e-56 41