Gene Information

Name : Hhal_0613 (Hhal_0613)
Accession : YP_001002200.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Unknown
Product : IstB ATP-binding domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 693168 - 693932 bp
Length : 765 bp
Strand : +
Note : PFAM: IstB domain protein ATP-binding protein; IstB ATP binding N-terminal domain protein; SMART: AAA ATPase; KEGG: hch:HCH_06235 IstB helper protein, IS21 family

DNA sequence :
ATGCTACCGCATCCAACCCTGGAGAAGCTCTCGGCGCTGAAGCTCAACGGCATGCGCGCCGCCGTCGAGGAGCAATTGGG
ACGCACGGACCTGGAGGCGATGCCCTTTCTCGATCGCCTCGCCCTGCTGGTCGAGCGCGAAGCAGCCGTGCGTGCCGATC
GACAACTGACAGCTCGGCTACGTGCCGCCAAGCTGCGCTACCCGGAGGCCTGCGTCGAGGGGATCGACCGCCGCGCCCGC
CGCAAGCTCTCGGGCGCTGTGCTCGAGCCGCTTTTCACCAGTCGGTGGGTGGCCGATCAGCGCAACGTGCTGATTAGTGG
TCCGACCGGCGTCGGCAAGTCGTACCTGGCCTGCGCCCTGGCGCAGAAGGCCTGCCGCGACGGCTACCGGGCCTACTACG
CACGCCTGCCCCGGCTGCTTGGCGAGCTGACCCTCGCCCGCGCAGACGGCACCTATGCTCGTCGCTTTGCCGAGCTGGCC
AAGGCCCAGGTCCTGGTACTCGACGACTTCGGTCTCGGGGCGCTGGATGACACCGACCGACGGGAACTGCTGGAGGTCCT
CGAGGATCGCTATCGGCGCCGTTCCACGGTGATTGCCAGTCAGCTGCCCATCGCCCAATGGTACGAGGTCATCGGCGATG
CCACACTGGCGGACGCCATCCTCGATCGGGTGGTGCACAACAGCTATCGCCTCGAGATGCAGGGCGAATCCATGCGTCGC
TCCCAGGATGCCCTCGAGACAACCACCTCGGAGTCGAACCCATGA

Protein sequence :
MLPHPTLEKLSALKLNGMRAAVEEQLGRTDLEAMPFLDRLALLVEREAAVRADRQLTARLRAAKLRYPEACVEGIDRRAR
RKLSGAVLEPLFTSRWVADQRNVLISGPTGVGKSYLACALAQKACRDGYRAYYARLPRLLGELTLARADGTYARRFAELA
KAQVLVLDDFGLGALDDTDRRELLEVLEDRYRRRSTVIASQLPIAQWYEVIGDATLADAILDRVVHNSYRLEMQGESMRR
SQDALETTTSESNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0004c ACA01821.1 IstB protein Not tested VPI-2 Protein 9e-38 43
ORF_5 AAZ04416.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 2e-42 41
APECO1_3529 YP_854246.1 ISEc12 ATP-binding protein Not tested PAI I APEC-O1 Protein 3e-42 41
unnamed CAC39295.1 hypothetical protein Not tested LPA Protein 2e-42 41