|
Name : fliP (Hhal_0484) Accession : YP_001002073.1 Strain : Halorhodospira halophila SL1 Genome accession: NC_008789 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 553535 - 554275 bp Length : 741 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGCCCACACTCCGAATCCTGCTCCTTGTGGCGTTGCTCCTCTGCCCCGCGCTGGCCTATGGCCAGACGGGGCTGGAGGC GCTGACCATCGAGGAGACCGAGGACGGGCAGACCTGGAGCCTCAGCGTCCAGGTCCTCGTCCTGATGACCCTGCTGACGC TGCTGCCGGCGATGGTGCTGATGATGACCGCGTTCACGCGCATCATCGTCGTCCTCGCCATCCTGCGTCAGGCCCTGGGC ACCGCCTCAACCCCGTCGAACCAGGTGCTCATCGGGCTGGCGCTGTTCCTGACCCTGTTCGTGATGATGCCGGTCTTCGA CGAGATCAACGAGACCGCGCTGCAGCCGTACATGGCCGAGGAGATGGGGGCGGAGGAGGCGCTGGAGCAGGCCAGCGAGC CCATGCGCGAGTTCATGATCCGCCAGACCCGCGAGGACGACATCGCCCTGTTCCTGCGCATCGCCGATTACGGCGAGGTG GACAGCCCCGACGATGTCCCCATGTCGGTGCTGATCCCGGCGTTCATGACCAGCGAGCTCAAGACGGCGTTCATCATCGG CTTCGTGCTGTACCTGCCGTTTTTGGTCATTGACCTGGTGGTGGCCAGTACGCTGATGTCCATGGGCATGCTGATGCTCT CGCCGATGATCATCTCGCTGCCGTTCAAGATCATGCTCTTCGTTCTGGTCGACGGCTGGTCACTGATCATGGGCACCCTG GCGTCCAGTTTCTTCCTGTGA Protein sequence : MPTLRILLLVALLLCPALAYGQTGLEALTIEETEDGQTWSLSVQVLVLMTLLTLLPAMVLMMTAFTRIIVVLAILRQALG TASTPSNQVLIGLALFLTLFVMMPVFDEINETALQPYMAEEMGAEEALEQASEPMREFMIRQTREDDIALFLRIADYGEV DSPDDVPMSVLIPAFMTSELKTAFIIGFVLYLPFLVIDLVVASTLMSMGMLMLSPMIISLPFKIMLFVLVDGWSLIMGTL ASSFFL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-21 | 43 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-21 | 43 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 1e-18 | 42 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 1e-18 | 42 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 1e-18 | 42 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 3e-21 | 42 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 2e-17 | 42 |
| hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 4e-21 | 42 |
| hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 3e-21 | 42 |
| hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 4e-21 | 42 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-20 | 41 |
| hrcR | YP_198720.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-20 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_001002073.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 7e-44 | 67 |
| fliP | YP_001002073.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 2e-45 | 66 |
| fliP | YP_001002073.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 2e-41 | 59 |
| fliP | YP_001002073.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 4e-43 | 58 |
| fliP | YP_001002073.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 2e-20 | 42 |
