Gene Information

Name : Hhal_0260 (Hhal_0260)
Accession : YP_001001856.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 299187 - 300167 bp
Length : 981 bp
Strand : -
Note : PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: aeh:Mlg_1208 protein of unknown function DUF1722

DNA sequence :
ATGAGCCGGCCAAGCGATCAGACCGCGTCGCAGCCGCAGATTCCGGTGGGCGTGAGCAGCTGCCTGCTCGGCGAGGAGGT
GCGCTACGACGGCAGTCACAAGCGCAACCCCTTCGTTACCGAGGCACTCTCGCGCTACTTCCGCTACGTGCCCGTCTGCC
CCGAGGTGGCCATCGGGCTGCCCACCCCGCGGCCGCCGATCCGCCTGGAGCTGGATGCGGACAACCGGGTGCGCGTGCGC
GGGGTGCGGGATCGGCAGACCGACGTCACCGAGGCCATGGAGGCCTTCGGCCGCGAGAAGGGGCGGGAGCTCCACTGGCT
CAGCGGCTACATCCTCAAGGCCAAGTCGCCGAGCTGCGGTATGGAGCGCGTCAAGGTCTACAAACCCGACGGCCATCCGG
CCGGTATCCCCGGGCGGGGCGCCTATGCACGGACGCTGATGGAGGCCAACCCACTGCTCCCGGTGGAGGAGGAGGGACGG
CTCAACGATCCGTCCCTGCGTGAGGGCTTTGTCTGCCGGGTCTTCTGCTACTACCGTTGGCAGCGCCTGGTCGAGGCGGG
CCTGACGCCCAAGGCGCTGGTGGATTTCCACGCCGAGCACAAGCTGTTGCTCATGGCCCACGACGATCAGCGCATGCGCG
AGCTGGGGCGGCTGGTCTCGACGCTGGGCGAGCGGTCGCTGGAGGCGGTGGCCGACGAGTACATCCACGGGTTCATGGCG
GCCCTGGCCCGGCCGGCGACGCGCGGCCGGCACGCCAACGTGCTCTACCACCTGCTCGGCTATCTCAAACGCGAGCTGGA
CCCGGCGGACAAGCAAGAGGTGGTGAGTGTCATCGAGCAGTACCGCACCGGTATGGTGCCGTTGATCGTCCCGGTGATGC
TGTTGCGTCACCACTTCCGCCACTGGCCGGATCCCTATGTGGAGCGGCAGTTCTATCTCTACTGGAGTCCGCCGGAACTG
GCGCTGCTCAATCAGGTCTGA

Protein sequence :
MSRPSDQTASQPQIPVGVSSCLLGEEVRYDGSHKRNPFVTEALSRYFRYVPVCPEVAIGLPTPRPPIRLELDADNRVRVR
GVRDRQTDVTEAMEAFGREKGRELHWLSGYILKAKSPSCGMERVKVYKPDGHPAGIPGRGAYARTLMEANPLLPVEEEGR
LNDPSLREGFVCRVFCYYRWQRLVEAGLTPKALVDFHAEHKLLLMAHDDQRMRELGRLVSTLGERSLEAVADEYIHGFMA
ALARPATRGRHANVLYHLLGYLKRELDPADKQEVVSVIEQYRTGMVPLIVPVMLLRHHFRHWPDPYVERQFYLYWSPPEL
ALLNQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 1e-51 43
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 1e-51 43
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 9e-52 43
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 9e-52 43
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 8e-52 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hhal_0260 YP_001001856.1 hypothetical protein VFG0490 Protein 5e-52 43