Gene Information

Name : Hhal_0023 (Hhal_0023)
Accession : YP_001001620.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 25340 - 25990 bp
Length : 651 bp
Strand : -
Note : PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: pen:PSEEN3450 response regulator GacA (global antibiotic and cyanide control protein, LuxR/UhpA family)

DNA sequence : 
ATGATTCGGGTTGTTCTGGCAGACGATCATCGCCTGATCCGACAGGCCATTGACGGGATGCTCCGGGATATTCCGGACAT
CCAGATCGTTGCCCACGCTGAGAACGCCGAGCATGCAGTGGCCGCGGTGCGCGAGCAGGAGCCGGACGTTGTCTTGATGG
ATCTCCAGATGCCGGGTATGGGCGGCGTCGAGGCGATCCGTCGACTATACCGCAGTCACCCGAAGGTCGGGGTCATCGCG
TTGACTGTCTACCAGTCGGGACCGTATCCGGCCCACGCCTTGCGAGCGGGCGCCAAGGGGTACGTGCATAAGGGGGCCGA
TCGGGATGAGCTGATCGAGGCCATCCGCTCGGTGTACCTCGGGCGCCGCTACATCTGCCACGAGGTGGCTCGCCACGTCG
CCCTGAACAGTCTCGATGGCACGGGGGAGAGCCCGTTCGACCATCTCACGCCGCGCGAATTCGAGGTGCTGATGCGGATC
CTCAACGGTCAGCGGGGAACCAGCATCGCCAAGGACCTGTGCCTTAGCCCGAAGACCGTGAGCACCTACCGCAGCCGGAT
CTTCGAGCGGCTGGGCGTTCGCAACGACGCCCAGCTGACGCGGATCGCTATCGACTACGGTCTGCTCGAGGCCAAATCCG
ACGAGCACTGA

Protein sequence : 
MIRVVLADDHRLIRQAIDGMLRDIPDIQIVAHAENAEHAVAAVREQEPDVVLMDLQMPGMGGVEAIRRLYRSHPKVGVIA
LTVYQSGPYPAHALRAGAKGYVHKGADRDELIEAIRSVYLGRRYICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRI
LNGQRGTSIAKDLCLSPKTVSTYRSRIFERLGVRNDAQLTRIAIDYGLLEAKSDEH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 3e-38 46
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 3e-38 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hhal_0023 YP_001001620.1 two component LuxR family transcriptional regulator VFG1889 Protein 4e-36 43