Gene Information

Name : Hhal_0233 (Hhal_0233)
Accession : YP_001001829.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Unknown
Product : glycine betaine/L-proline ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : -
Position : 267589 - 268788 bp
Length : 1200 bp
Strand : +
Note : KEGG: hch:HCH_01361 ABC-type proline/glycine betaine transport system, ATPase component; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGACCGAAAAACTCGTCGTAGAAGACCTCTACAAGATTTTCGGCCCGAAACCCGAACGGGCCATGGAGCTGCTGAAACA
GGGCTATGACAAGGACGCGATCTTCCAGCGCACCGGCAATACCGTCGGTGTGCGGGAAGCGAGTTTCACCATCCACGAGG
GCGAAGTCTTCGTCATCATGGGCCTGTCGGGTTCCGGCAAATCGACCATGGTGCGGATGTTCAACCGCCTCATCGACCCG
ACCTACGGCCACATCTACCTCGACGGCCAGGACATCATGCAGATGAGCCAGCAGGAGCTCATCGACATGCGCCGCCGCGA
CATGTCCATGGTGTTCCAGTCCTTCGCCCTGCTCCCGCACAAGACCGTTGCCGAGAACGCCGCCTTCGGCCTCGACGTCT
CCGGCCACGGCGCGACGGAGCGGCGCGAGAAGGCGCTCAAGGCCCTGGAGGCTGTGGGCCTGGCGGCCAACGCCGACAGC
TTCCCGGACGAGCTCTCCGGCGGCATGAAACAGCGCGTGGGGCTGGCCCGCGCCCTGGCGACGGATCCAACCATTCTGCT
CATGGACGAGGCCTTCTCGGCCCTCGACCCACTGATCCGTACCGAGATGCAGGATGAGCTCATCCGCCTGCAGCAGGAGC
AGAGCCGCACCGTCATCTTCATCTCCCACGACCTGGACGAGGCCATGCGCATCGGCGATCGCATCGCCATCATGGAGGGC
GGCCAGGTGGTGCAGATCGGCACGCCGGAGGAGATCGTCTCCAACCCGGCCAACGAGTACGTGCGCTCCTTCTTCTACGG
CGTCGACGTCAGCCAGGTCTACAACGCCGGCGACATCGCCGAGCGCCGCCGGGTCACCGTCATCCAGCGCCCCGGCGTGG
ACGTGCGCACCGCACTCGAGCGGCTCAAGCACTACGCCAGCGACATCGGCGTGGTCATCGACCGCAGTCGCCGCTTCCAG
GGCCTGGTCTCCATCGACAGCCTGACCGACGCCATCCGCAGCGGCGGCAGCACCGAATACGGCGACGCCTTCCTCAGTGG
CGTGCAGACCATCCCGGCCGACACGGCAATCTCCGACGTGCTCGGGCCGTCGGCCGAGAGCGAGTACCCGCTGGTCGTGG
TGGATGACGACGGGCACTACGTCGGCACCCTCTCGCGCAGCCAGCTGCTGCTCACCCTGGATCGCACCCAACAGGCGTAA

Protein sequence :
MTEKLVVEDLYKIFGPKPERAMELLKQGYDKDAIFQRTGNTVGVREASFTIHEGEVFVIMGLSGSGKSTMVRMFNRLIDP
TYGHIYLDGQDIMQMSQQELIDMRRRDMSMVFQSFALLPHKTVAENAAFGLDVSGHGATERREKALKALEAVGLAANADS
FPDELSGGMKQRVGLARALATDPTILLMDEAFSALDPLIRTEMQDELIRLQQEQSRTVIFISHDLDEAMRIGDRIAIMEG
GQVVQIGTPEEIVSNPANEYVRSFFYGVDVSQVYNAGDIAERRRVTVIQRPGVDVRTALERLKHYASDIGVVIDRSRRFQ
GLVSIDSLTDAIRSGGSTEYGDAFLSGVQTIPADTAISDVLGPSAESEYPLVVVDDDGHYVGTLSRSQLLLTLDRTQQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 3e-86 50