|
Name : Hhal_2245 (Hhal_2245) Accession : YP_001003811.1 Strain : Halorhodospira halophila SL1 Genome accession: NC_008789 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 2458603 - 2460999 bp Length : 2397 bp Strand : + Note : PFAM: RNA binding S1 domain protein; SMART: Helix-hairpin-helix DNA-binding, class 1; Resolvase, RNase H domain protein fold; KEGG: aeh:Mlg_1472 RNA binding S1 domain protein DNA sequence : ATGGTCAGTGAGTCGATCCCGCAGCGCATCGCCCAGGAGCTGGGCGTGGGCAACCGGCAAGTCGAGGCCGCCATCGAGCT GCTCGACGGGGGCGCCACGGTCCCCTTCATCGCCCGCTACCGCAAGGAGGTCACCGGCGGCCTCGACGACAGCCAGCTCC GCTCGCTCGAGGAACGGCTGACCTACCTGCGTGAGCTCGACGAGCGCAAGGAGACGGTGCTCAAGGCCATCGACGAACAG GGCAAGCTCACCGACGAGCTGGCCGAGGCCATCCGGACCGCCGAGACCAAGACCCGGGTCGAGGACCTCTACCGCCCCTA CCAGAAGAAGCGCCGCACCAAGGCGCAGATCGCCCGCGAGGCCGGGCTGGAGCCCCTCGCCGACACCCTCCTCGCCGACC CGAGCCAGGTCCCCGAGGAGGCGGCGGCGCCCTACGTCACCGGACCCGCCGAGGAAGGGCAGGAGACCCCGGCCGTGGCC GATGTCGAGGCCGCCCTCGACGGCGCGCGGCAGATCCTCATGGAGCGCTTCGCCGAGGATGCCGACCTGCTTGAGGAACT GCGCGACTACGGCTGGCGCAAGGGCTATCTGGTCAGCCGCGTGGCCGAGGGCAAAGAGAAGGACGGCGCCCGCTTCCGCG ACTACTTCGAGCACGCCGAGCCGCTGCGCAAGATCCCCTCCCACCGCGCCCTGGCCATGCTCCGCGGGCAGAGCGAGGAG ATCCTGCGCCTGGAGATCGCCTGGTCCGACGCCGAGGCCCGCGGCGAGAGCGACGAGCGCAGCGTCGGTGAGGCGGCCAT CGCCCGGCGGTTCGCCATCGCCGACCACGGCCGACCGGCCGACGCCTGGCTGGCGCGCACCGTTCGCCTGGCCTGGCGGG CGAAACTCTCCACCCACCTCGACCTGGCCCTCAAGCGCCAGCTGCGCGAGCAGTCCGAAGAGGAAGCCATCCGCGTCTTC GGCGCCAATCTGGAGGATCTGCTGCTGGCGGCGCCGGCCGGCCCCAGGCCGACCATCGGCCTCGATCCGGGGCTGCGCAC CGGGGTCAAGGTCGCGGTCATCGACGCCACCGGGGCCGTGGTCGATACCGCCACGATCCACCCCTTCACCAGCCGCAACA AAGACCCCGAGGGATCGCTCAAGAGCCTCGCTGACCTGGCCCGCAAGCACGAGGTGGGGCTGGTGGCCATCGGCAACGGC ACCGCCTCCCGCGAGACCGACGCCCTGGTCGGTGAGCTGATCAAGCGCCACCCGGAGCTGGGCCTCCACAAGGTGGTGGT CTCGGAGGCCGGCGCCTCGGTCTACTCCGCCTCCGAGCACGCCTCGCGAGAACTCCCCGAGCTGGACGTCTCCCTGCGCG GCGCGGTCTCCATCGCCCGACGCCTGCAGGACCCCCTGGCCGAGCTGGTGAAGATCGAGCCCAAGTCCATCGGCGTCGGT CAGTACCAGCACGACGTCAATCAGAGCCACCTCGGGCGAAAGCTCGATGCGGTCGTGGAGGACTGCGTCAACGCCGTCGG CGTGGACGCCAACACCGCCTCGGCGCCGCTGCTCGCCCGCGTCTCCGGCCTCGGCCCGGGCCTGGCCGAGAAGATCGTCC AGCACCGCTTCGACAACGGCCGCTTCCGCACGCGCAAGGATCTCCAGGGGGTCCCGCGACTCGGCCCCAAGGCCTTTGAA CAGGCCGCCGGCTTCCTGCGCATCCCCCAGGGCGACAACCCGCTGGACGCCTCCGCCGTCCACCCGGAGGCGTACCCGGT GGTCGAGCGGATCTGCGCCGAGACCGGCCGGAGCGTGGCCGATCTGATCGGCGACGAGGGCTTCCTCGGCGGCCTCGACC CGAAGGCGTACACCGACGAGCGCTTCGGCGAGCCCACGGTGCGCGACATCCTCGGCGAGCTCGCCAAACCGGGCCGGGAC CCGCGCCCCGAGTTCCGTACCGCCGCCTTCCGCGAAGGGGTGGAGAAAATCCAGGATCTGGAACCGGGCATGGTCCTCGA GGGCACGGTGACCAACGTCGCCAACTTCGGCGCCTTCGTCGATATCGGGGTCCACCAGGACGGGCTGGTGCACATCTCCG CCCTCGCCCACGAATTCGTCCGCGACCCGCGCGACAAGGTCCGCACCGGGGACGTCGTCCAGGTCAAGGTCATGGAAGTC GACCTGGAGCGCCAGCGGATCGGCCTGTCCATGCGCCTCGACGACGACCCCAACGCCCAGGCCGAGGGGGGCCGCAAGGG GGCCAATGGCAAGGGCGCCTCGGCCGCCCGGGGCAAGGGCGATGGCTCCGGCAACAAGGCGACCGGGCGCGGATCGAAGA AGGGCAAGAAGCAGGAAAAGGCCGAACCCGCCACCGCCACAGCGCTGGCCGAGGCCTTCCGCAAGGCCCGCTCCTGA Protein sequence : MVSESIPQRIAQELGVGNRQVEAAIELLDGGATVPFIARYRKEVTGGLDDSQLRSLEERLTYLRELDERKETVLKAIDEQ GKLTDELAEAIRTAETKTRVEDLYRPYQKKRRTKAQIAREAGLEPLADTLLADPSQVPEEAAAPYVTGPAEEGQETPAVA DVEAALDGARQILMERFAEDADLLEELRDYGWRKGYLVSRVAEGKEKDGARFRDYFEHAEPLRKIPSHRALAMLRGQSEE ILRLEIAWSDAEARGESDERSVGEAAIARRFAIADHGRPADAWLARTVRLAWRAKLSTHLDLALKRQLREQSEEEAIRVF GANLEDLLLAAPAGPRPTIGLDPGLRTGVKVAVIDATGAVVDTATIHPFTSRNKDPEGSLKSLADLARKHEVGLVAIGNG TASRETDALVGELIKRHPELGLHKVVVSEAGASVYSASEHASRELPELDVSLRGAVSIARRLQDPLAELVKIEPKSIGVG QYQHDVNQSHLGRKLDAVVEDCVNAVGVDANTASAPLLARVSGLGPGLAEKIVQHRFDNGRFRTRKDLQGVPRLGPKAFE QAAGFLRIPQGDNPLDASAVHPEAYPVVERICAETGRSVADLIGDEGFLGGLDPKAYTDERFGEPTVRDILGELAKPGRD PRPEFRTAAFREGVEKIQDLEPGMVLEGTVTNVANFGAFVDIGVHQDGLVHISALAHEFVRDPRDKVRTGDVVQVKVMEV DLERQRIGLSMRLDDDPNAQAEGGRKGANGKGASAARGKGDGSGNKATGRGSKKGKKQEKAEPATATALAEAFRKARS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 59 |
