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Name : Hhal_2179 (Hhal_2179) Accession : YP_001003745.1 Strain : Halorhodospira halophila SL1 Genome accession: NC_008789 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 2390909 - 2391919 bp Length : 1011 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pca:Pcar_1467 capsular polysaccharide biosynthesis DNA sequence : GTGCGAATCCTCGTCACCGGCGTGGCCGGTTTCATCGGCATGCACTGCGCCCGGCAGCTGATCGAGGCGGGCCATCAAGT CGTCGGAATCGATAATCTCAACGACTACTACGACGTAACCCTCAAGGAGGCGCGCCTGGACGAGCTGCGCCGCTGCGAGG GGGATTTCTACTTCGCCCGCGTAGACCTCGCCGATTCCGCCGGCGTCGACGCCCTCTTCCGCGAGGGGCGCTTCGACCGC GTCATCCATCTGGCCGCCCAGGCCGGCGTGCGCTATTCCCTGGAGAATCCGCGGGCGTACATCGACAGCAATCTGGTGGG CTTCGGCAACATCCTGGAGGGGTGCCGTCACCACGACACCGGGCACCTGGTCTACGCCTCTTCGAGTTCAGTCTACGGCG CCAACACGCGTATGCCGTTCTCGGTCCACGACAACGTCGATCACCCGGTGTCGCTCTACGCGGCCACCAAGAAGTCCAAC GAGCTGATGGCGCACACCTACGCCCACCTCTACGGTCTGCCCGTCACCGGTCTGCGCTTCTTCACCGTCTACGGCCCCTG GGGGCGTCCGGACATGGCGCCGTTCAAGTTTACGCGGTCGATCCTCGCCGGAGAGCCTATCGAGGTCTACAACTACGGCC GCATGCGCCGCGACTTCACCTACATCGACGATATCGTCGACGGGGTGCTGCGCGTGATGGACACCCTGCCGGAGCCGGAT CCGGAGTTCTCCACCGATGCCCCGGATCCGGCGCGCAGCAACGCGCCCTACCGCGTCTACAATATCGGCAACCATCGGCC TGTGGCGCTCGAGGACTTCATCGCCGCCCTGGAGGACGCCTGCGGGCGGAAGGCGCAGCGGCACGAGCTGCCCATGCAGC CAGGAGACGTCGCCGAGACCTACGCCGACATCGACGATCTGACCGCCGCGACGGGGTGGCACCCGCAGACGGCCATCGAG CAGGGTTTACCGCAGTTCGTGGCTTGGTATCGAGCGTTTTACGGGGTCTGA Protein sequence : MRILVTGVAGFIGMHCARQLIEAGHQVVGIDNLNDYYDVTLKEARLDELRRCEGDFYFARVDLADSAGVDALFREGRFDR VIHLAAQAGVRYSLENPRAYIDSNLVGFGNILEGCRHHDTGHLVYASSSSVYGANTRMPFSVHDNVDHPVSLYAATKKSN ELMAHTYAHLYGLPVTGLRFFTVYGPWGRPDMAPFKFTRSILAGEPIEVYNYGRMRRDFTYIDDIVDGVLRVMDTLPEPD PEFSTDAPDPARSNAPYRVYNIGNHRPVALEDFIAALEDACGRKAQRHELPMQPGDVAETYADIDDLTAATGWHPQTAIE QGLPQFVAWYRAFYGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-95 | 57 |
