Gene Information

Name : Hhal_2175 (Hhal_2175)
Accession : YP_001003741.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2385841 - 2386605 bp
Length : 765 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_1042 ABC transporter related

DNA sequence : 
GTGGCCATCGAAGCGGAGGGGCTGTGCGCCGGCTACCACGGTGTGGATGCGGTGGCCGATGCCCGTCTGCGGATCCCCGC
CGGTGAATTGGTGGCCTTGGTGGGCCCCAACGGCGCCGGCAAGTCCACCCTCCTCAAGCTGATCATGGGGCTGATCCGGC
CGCGACGCGGTCAGATCCGCATCGGGGGGCGCTCGCCCGGGCAGGCGCGTGGCGCCGGTGACGTGGCCTACATGCCGCAG
CACGAGACCCTGGACTGGGACTTCCCCGCCTCGGTCCGGGATGTGGTGTTCTCCGCGCGTTACCCGAGCCTGCGCCGGAA
CGGGGTGCAGCGCTGGCTGCCGCGCCGGTGGCTTGGAGCGGAGCATCATCAGGCGGTGGCCGAGGCGCTGTCGGCCACCG
ACATGGCGGAGCTGGCCGATCGCCACATCAGCGAGCTCTCCGGAGGGCAGAAGAAGCGCGTGTTGCTCGCTCGCGCCCTG
GCGCAAAAGGCGCAGTTGCTCCTCCTCGACGAGCCCCTGGTGGGCGTTGATCGCTCCAGCGAGGCGCTGATCTTTGGCGT
GCTGCGGGACCTGCGCGCCGCCGGGCGGACGGTGGTCCTGGTGACCCACGACATCGCCGGGGCTCGGCGTCACGCCGACC
GGCTGGTCCTGTTCAACCGCTCGGTGATCGCCTCGGGCCCGCCTGAGGAGGTCATGGCCGACGAGCGCTCGCTTCTGCGC
GCCGCCGATCCCACCTTCGCCCGCGGTCTGCAGGAGGAGTCCTGA

Protein sequence : 
MAIEAEGLCAGYHGVDAVADARLRIPAGELVALVGPNGAGKSTLLKLIMGLIRPRRGQIRIGGRSPGQARGAGDVAYMPQ
HETLDWDFPASVRDVVFSARYPSLRRNGVQRWLPRRWLGAEHHQAVAEALSATDMAELADRHISELSGGQKKRVLLARAL
AQKAQLLLLDEPLVGVDRSSEALIFGVLRDLRAAGRTVVLVTHDIAGARRHADRLVLFNRSVIASGPPEEVMADERSLLR
AADPTFARGLQEES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-23 44
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-23 44
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-23 43
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-23 43
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-23 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hhal_2175 YP_001003741.1 ABC transporter-like protein BAC0350 Protein 9e-24 43
Hhal_2175 YP_001003741.1 ABC transporter-like protein BAC0400 Protein 2e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hhal_2175 YP_001003741.1 ABC transporter-like protein VFG0526 Protein 9e-24 43