Gene Information

Name : Hhal_1918 (Hhal_1918)
Accession : YP_001003484.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2114423 - 2115133 bp
Length : 711 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_1576 ABC transporter related

DNA sequence : 
GTGTCCCCCCAAGAAGTCTTCCGTGCCGAGGGCATTACCAAGGTCTACCGCATGGGCGAGGTGGCGGTGCACGCCCTGCG
CGGGGTGGATCTGGTCCTCTACGCCGGGGAGCTGGTGGTGCTCCTTGGGCCGTCGGGCAGTGGCAAGTCGACGCTGCTGA
ACATCCTCGGTGGGCTCGATACGCCCACCAGTGGTCGGGTCATCGTCCAGGGGCGCGATCTCACCCGAGCCGGGGAGGCG
GAGCTGACGGCGTTCCGCCGCCACTTCGTCGGCTTTGTCTTCCAGTTCTACAACCTGATCCCGAGCCTCACGGCGCGCGA
GAACGTGGCCATTGTCACCGAGATCGCCCGCGACCCCATGCGCCCGGAGGAGGCACTCGAGCTGGTTGGCCTCGGTGCCC
GCCTGGATCACTTTCCCTCCCAGCTCTCCGGGGGCGAGCAGCAGCGGGTGGCCATCGCCCGCGCCGTGGCCAAGCGCCCG
CAGGTCCTGCTCTGTGATGAGCCCACCGGTGCCCTCGACTCGAAGACCGGTGTGACCGTGCTGGAGGTCCTCGAGCGCAT
CAACGCGGAGTTGGGCACCACCACCGCGCTGATCACCCACAACGCGGATATCGCCGCCATGGCTCACCGGGTGGTGGACT
TCAAGGACGGCCTGATCGACTCGGTGCGCACCAACGATCAGCGGCGTCGGGCGGCGGAGCTCTCCTGGTGA

Protein sequence : 
MSPQEVFRAEGITKVYRMGEVAVHALRGVDLVLYAGELVVLLGPSGSGKSTLLNILGGLDTPTSGRVIVQGRDLTRAGEA
ELTAFRRHFVGFVFQFYNLIPSLTARENVAIVTEIARDPMRPEEALELVGLGARLDHFPSQLSGGEQQRVAIARAVAKRP
QVLLCDEPTGALDSKTGVTVLEVLERINAELGTTTALITHNADIAAMAHRVVDFKDGLIDSVRTNDQRRRAAELSW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-35 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hhal_1918 YP_001003484.1 ABC transporter-like protein NC_012469.1.7685735. Protein 2e-49 48
Hhal_1918 YP_001003484.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-33 48
Hhal_1918 YP_001003484.1 ABC transporter-like protein NC_012469.1.7686878. Protein 6e-37 44
Hhal_1918 YP_001003484.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-38 44
Hhal_1918 YP_001003484.1 ABC transporter-like protein CP001581.1.gene598.p Protein 3e-39 42
Hhal_1918 YP_001003484.1 ABC transporter-like protein NC_012469.1.7686946. Protein 2e-20 42