Gene Information

Name : Hhal_0160 (Hhal_0160)
Accession : YP_001001756.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 186157 - 187671 bp
Length : 1515 bp
Strand : -
Note : PFAM: protein of unknown function DUF877; KEGG: pca:Pcar_2815 hypothetical protein

DNA sequence :
ATGAGTGAGCAGACGAGCGCAGATAGGGCCGCAGAAGCCACGGCCCCGGCGGCAAGCTATGCGCACCTGTGCCAGCTGGC
CGAGGTCGAGCCGGTCTCCGGCGCCCTGGAGATCGCCACCTTCCAGGACTCGGCGGTCATGGCGGACATCCCCTCGGAGA
GTCGATTGACCGCTGCCCTGCAGGTGTTCCTGGATCTCGCCAGTCAGGACGGCGAGCTGGTCGAGCGCATCGACAAGGCG
TTGCTCGACGAGTATATCGCCCGCATCGACGCGGCGGTGAGCGAGCAGCTCGACGCCGTCCTGCACCATCCGGAGTTCCA
GCGGGTGGAGTCGGCCTGGCGCAGCCTGCGTTTCCTCGTCGAACGCAGCGATCCCAAGGCGAACATCAAGCTGGAGCTGC
TCGATGTCTCCAAGGAAGAGCTGGCCGGCGAGCTCGAGGATGTCACTGACATCACCCAGTCCGGCCTGTACCAGCACGTC
TATGTGCAGGAGTACGACACCCCGGGCGGGGAGCCCTTAGCCGCCATGGTCTCCAACTATGAGTTCGACTGCTCGGCGGC
GGACATCAACCTGCTGACCGAGGTATCCCGGATTGCGGCGGCGGCCCACTGTCCCTTCCTCGGTGCCGTCGGCCGGGACT
TCTTCGGCAAGGCCTCCCTGGATGAGGTGGTCCGGATCCCGGATATCGCCAGCTATCTAGATAAGGCCGAGTACGCCCGC
TGGCGCGGGTTCCGCGACACCGAAGACGCTCGGTACGTCGGCCTCACCCTGCCGCGGTTCCTGCTGCGCCTGCCCTACGG
GGCCGACAACCCCACCCGTGCGTTCGACTACCGCGAGAACGTCACCGGGGTCGATCACGATCGCTACCTTTGGGGGAATG
CAGCCTTCGCCTTTGCCGCCAACATGGCCCGTTCCTTCAAGGCCTACGGGTGGACGGTCAATATTCGCGGGCCGGAGTCC
GGCGGCAAGCTCGAGCAGCTGCCGATCCACGTCTTCGACCTCGGCCGTGGGGCGCAGACCAAGACCCCCACCGAGGTGCT
CATCTCCGAGAACCGCGAAATCGAGCTGGCCGAGGCCGGATTCATCCCGCTGAGCTTCTACAAGAACAGCGATTACGCCT
GCTTCTTCTCGGCCAACTCGGCGCAGCGTCCGGCCCGCTACAACAGTCCCGCGGCGACGGCGAATGCCCGGATCAACGCC
CGGTTGCCGTACATCTTCCTGGTCTCCCGTCTGGCTCACTATCTCAAGGTGCTGCAGCGGGAGAATATCGGCTCGGCCAA
GAGCCGGCAGGACCTGGAAAACGAGCTCAACGATTGGCTGCAGGGGCTGGTGACCAAGATGCAGAATCCGGATCCCGATC
TGGTCGCTACCCGCCCGCTACGCGAGGGGGTGGTGGAGGTCGAGGAGGTCCCCGAAAACCCGGGCTTCTACCGGGTCAAC
ATGTCGGTGATGCCGCACTTCCAGATCGAGGGTATCGACCTGAAGCTCTCGCTGGTGTCGCAGTTGCCGACCTGA

Protein sequence :
MSEQTSADRAAEATAPAASYAHLCQLAEVEPVSGALEIATFQDSAVMADIPSESRLTAALQVFLDLASQDGELVERIDKA
LLDEYIARIDAAVSEQLDAVLHHPEFQRVESAWRSLRFLVERSDPKANIKLELLDVSKEELAGELEDVTDITQSGLYQHV
YVQEYDTPGGEPLAAMVSNYEFDCSAADINLLTEVSRIAAAAHCPFLGAVGRDFFGKASLDEVVRIPDIASYLDKAEYAR
WRGFRDTEDARYVGLTLPRFLLRLPYGADNPTRAFDYRENVTGVDHDRYLWGNAAFAFAANMARSFKAYGWTVNIRGPES
GGKLEQLPIHVFDLGRGAQTKTPTEVLISENREIELAEAGFIPLSFYKNSDYACFFSANSAQRPARYNSPAATANARINA
RLPYIFLVSRLAHYLKVLQRENIGSAKSRQDLENELNDWLQGLVTKMQNPDPDLVATRPLREGVVEVEEVPENPGFYRVN
MSVMPHFQIEGIDLKLSLVSQLPT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 2e-91 45
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-94 44
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 2e-94 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hhal_0160 YP_001001756.1 hypothetical protein VFG2475 Protein 1e-100 49
Hhal_0160 YP_001001756.1 hypothetical protein VFG2093 Protein 5e-100 43
Hhal_0160 YP_001001756.1 hypothetical protein VFG2070 Protein 3e-85 42