Gene Information

Name : Hhal_1582 (Hhal_1582)
Accession : YP_001003148.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1722073 - 1723488 bp
Length : 1416 bp
Strand : -
Note : KEGG: aeh:Mlg_0013 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp

DNA sequence :
ATGGCTGCAACCGGTAAGGACGTACTCAAGCTCATCAAGGATGAGGACGTGAAGTTCGTCGACCTGCGCTTCACCGACAC
GCGCGGGAAAGAGATGCACGTAACCCTGCCCGTCTCCCAGGTCGATGAGGACCTGTTCGAGCACGGCAAGATGTTCGACG
GCTCTTCCATCGACGGCTGGAAGGGGATCCAGGAGTCGGACATGATCATGCTCCCGGATGCCGAGAGCGCCGTCCTCGAC
CCCTTCACCGATGAGCCGACCCTCAAGCTGGTCTGTGACATCCTCGAGCCGAGCACTCTGCAGGGCTACGACCGCGATCC
GCGCTCGGCCGCCAAGCGGGCCGAGGCGTATCTGGCCTCCACGGGTATTGGAGATAGTGCCCTGTTCGGTCCCGAGCCGG
AGTTCTTCGTCTTCGACGACGTCCGCTGGGGCGCCGACATGAGCGGCTGCTTCTATAAGGTGGACTCCGAGGAGGCCGGC
TGGAACTCCGAGCGGGTCTACCCAGACGGTAATATCGGTCACCGCCCCGGCGTGAAGGGCGGCTACTTCCCGGTCCCGCC
GGTGGATTCGCTGCACAACATCCGCGGCGCCATGTGTCAGGCCCTGGCCGATATGGGCCTAGAGCCGGAGGTCCACCACC
ACGAGGTGGCCACTGCCGGTCAGGGGGAGATCGGTACCGCGGCCCGTACCCTGGTCAAGAAGGCCGACGAGCTGCAGACG
CTCAAGTACTGCGTGCACAACGTCGCCCACGCCTACGGCAAGACCGCCACCTTTATGCCCAAGCCGCTAGTGGGCGACAA
CGGCAACGGCATGCACGTGCACCAGTCGGTCTCCAAAGGCGGCAACAATATCTTCACCGGGGACCAGTACGGCGGGCTCT
CCGAGGAGGCGCTCTACTACATCGGCGGCATCATCAAGCACGCCAAGGCGATCAACGCCTTCGCCAACGCCTCCACCAAC
AGCTACAAGCGCCTGGTGCCCGGCTTCGAGGCGCCGGTGCTGCTCGCCTACTCGGCGCGCAATCGCTCCGCCTCGGTGCG
GGTGCCCTATGTGGCCAACCCCAAGGCGCGGCGGATCGAGGTCCGCTTCCCGGACTCCACCGGCAACCCGTACCTGACCT
TCGCCGCTATGCTGATGGCCGGTCTCGACGGCATCCGCAACAAGATCCACCCCGGCGAGGCGATGGACAAGGACCTCTAC
GACCTGCCGCCGGAGGAGGAGAAGGAGATCCCCAAGGTCGCCTTCCAGCTCGACGAGGCGCTCGAGGCCCTGGACAACGA
CCGCGAGTTCCTCAAGCAGGGCGGGGTCTTCTCCGACGACCTGATCGACGCCTACATCGAACTGAAGATGGAGGAGGTCA
CCCGCCTTCGCATGACCACCCATCCGGTGGAGTTCGACCTGTATTACAGCGTCTGA

Protein sequence :
MAATGKDVLKLIKDEDVKFVDLRFTDTRGKEMHVTLPVSQVDEDLFEHGKMFDGSSIDGWKGIQESDMIMLPDAESAVLD
PFTDEPTLKLVCDILEPSTLQGYDRDPRSAAKRAEAYLASTGIGDSALFGPEPEFFVFDDVRWGADMSGCFYKVDSEEAG
WNSERVYPDGNIGHRPGVKGGYFPVPPVDSLHNIRGAMCQALADMGLEPEVHHHEVATAGQGEIGTAARTLVKKADELQT
LKYCVHNVAHAYGKTATFMPKPLVGDNGNGMHVHQSVSKGGNNIFTGDQYGGLSEEALYYIGGIIKHAKAINAFANASTN
SYKRLVPGFEAPVLLAYSARNRSASVRVPYVANPKARRIEVRFPDSTGNPYLTFAAMLMAGLDGIRNKIHPGEAMDKDLY
DLPPEEEKEIPKVAFQLDEALEALDNDREFLKQGGVFSDDLIDAYIELKMEEVTRLRMTTHPVEFDLYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-106 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hhal_1582 YP_001003148.1 glutamine synthetase VFG1399 Protein 4e-108 50