Gene Information

Name : Hhal_1417 (Hhal_1417)
Accession : YP_001002986.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1530892 - 1531680 bp
Length : 789 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_1311 ABC transporter related

DNA sequence : 
GTGTCCGCTACTTCTCCAACTGACGGAACGGCTGCCGGGCGGCACAGCGCCGATCGGCAGCCTCTGCGCTCCCGGACGGG
TCGTGACGGGGGCGAGGCTGAGGATAGCCCGCTGATCCGTTTGCTGGGGGTGCGCAAGGGCTACCCGGAGGGCGGGGGGG
TGCGTGTGGTCCTCGATGGGCTCGACCTCGTCATCCGGCGTGGCGAATCCCTGGCCGTGGTCGGACCAAGTGGCTCGGGC
AAATCCACCCTGCTCAACCTGATCGGCGCGATGGAAGGGCCGGATGCTGGCACGATCGGTTTCGGCGGCGAGGATCTGAC
GACGCTCGACGAGACGGCCCGGACGCTCTTCCGGCGCCGCCATCTCGGGTTCATTTTCCAGCAGCTCAATCTCGTCCCCA
CCCTTACGGTCCTGGAGAATCTCCTCCTGCCACTGGAACTCAACGGCGTCCTGAACCGCGAAGGGCGGCGCTACGCACGG
GAGTTGCTCGAACGGGTCGGCCTGCAGGGCCGAGAAGATACATTCCCGGAGCTCCTCTCTGGCGGCGAGCGACAGCGCGT
GGCGGTCGCCCGCGCCCTGGTGCACGGCCCTGATCTGCTGCTCGCCGACGAACCGACCGGTAGTCTCGACGGGGCCACGG
CGCAAACGGTGCTCGGACTCTTCAACGAGCTTCGTCGTGAGCGCGGCATGACCGCACTGATCGCCACCCACTCCACCGAT
GTCGCCGCGGCGGCGGATCGCGTGGTGGCGCTGCAGGGTGGTCGGCTCCAGGAGGTGGCTGCGGCGTGA

Protein sequence : 
MSATSPTDGTAAGRHSADRQPLRSRTGRDGGEAEDSPLIRLLGVRKGYPEGGGVRVVLDGLDLVIRRGESLAVVGPSGSG
KSTLLNLIGAMEGPDAGTIGFGGEDLTTLDETARTLFRRRHLGFIFQQLNLVPTLTVLENLLLPLELNGVLNREGRRYAR
ELLERVGLQGREDTFPELLSGGERQRVAVARALVHGPDLLLADEPTGSLDGATAQTVLGLFNELRRERGMTALIATHSTD
VAAAADRVVALQGGRLQEVAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-21 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-21 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-21 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-21 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hhal_1417 YP_001002986.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-16 48
Hhal_1417 YP_001002986.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-24 42