|
Name : Hhal_1340 (Hhal_1340) Accession : YP_001002909.1 Strain : Halorhodospira halophila SL1 Genome accession: NC_008789 Putative virulence/resistance : Virulence Product : Fis family two component sigma-54 specific transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 1447775 - 1449148 bp Length : 1374 bp Strand : + Note : PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: mca:MCA1713 sigma-54 dependent DNA-binding response regulator DNA sequence : ATGAGTGAACGTCCACGAATCCTCGTCGTCGACGACGACCCGAGCCTCTGCCGGCTCATGGAGATGCGCCTGGAGGCCTC CGGCTACGCACCGACCACGTGCGAAAGCGGCGAACGGGCCCTGGCCGAGCTGGAGCGCCAGCCCGCGGACGCCGTGATCA CCGACCTGCGCATGGAAGGCATGGACGGGCTGGCGCTGTTCGATGCCGTACGCGAACGCTGGCCGGCGCTACCCGTCATC ATCCTGACCGCCCACGGCTCCATCCAGGACGCGGTCGAGGCGACCCGCCGTGGCGTGCACGAATTCCTCACCAAGCCCTT CGACCCCCCTGAACTGCTCGAGCAACTGGAGAAGGCCCTCACCGCCCGCGGCGGGCAGACCTCCGATACCGCCCGCGAAG CCGGTCGGCGTCACGGCCTGGTGACCCGCAGCCCGCGCATGGAAGAGGTCCTTGAGCGTGCCCTGTTGGTGGCCGACTCC GACGCCAATGTCCTGATCCAGGGAGCGAGCGGCTCAGGTAAGGAGATCGTCGCCCGCGCCGTGCACGGTAACAGCCCCCG CTCGCAAGGGCCGTTCATCCCGGTGAACTGCGGCGCCATCCCTGAGACCCTGCTCGAATCCGAACTCTTCGGCCATGTCC GCGGCGCCTTCACCGGCGCCGATCGGGATCGCGCCGGCCTATTCCGCGACGCCGACGGCGGCACCCTGTTCCTCGACGAG ATCGGTGATATGCCCCTGCAGCTGCAGGTCAAGCTCCTGCGGGCCCTCCAGGAGCAGGTCATCCGACCGGTCGGCGGACG GGATCCGATCCCCATCAACGTGCGCGTCATCTCCGCCACCCACCGCGACCTGGAGGCAGCCCGCGCCGACGGGTCCTTCC GGGAAGACCTCTACTTCCGCCTGGCCGTCGTCACCCTCGCCCTGCCCCCGCTGGCCGAACGGCGTGAAGACATCCCCCTG CTGGCCCGGCACTTCCTGGCCGAGGCCACGCGTCGTCACGGGCGCCAGGTCGAAGACCTGTCACCGGAAGCCATCGAGGC GTTGGTCCAGGCCGAGTGGCCGGGCAACGTGCGCCAGCTGCAGAACGTCATCGAGCAGTGCGTGGCCCTGAGCACCAACG AGATCCTGCCGGAGCGCCTGGTACGGCAGGCGCTGAACCAGGATCAGGAGCCCTCGATTCCGACGCTGGCGGAGGCCCGT GAGGCGTTCGAGCGCGACTACCTGATCCGCCTGCTCAAGCTCACCGAGGGGAATGTGAGCCAGGCTGCCCGGCTCGCCGG CCGCAACCGCACCGAGTTTTACCGCCTGCTCGGTCGCCACCACCTCCAGGTGGCCGACTTCAAGGGCGGCACCGATCCGA ACGAGGACAACTAG Protein sequence : MSERPRILVVDDDPSLCRLMEMRLEASGYAPTTCESGERALAELERQPADAVITDLRMEGMDGLALFDAVRERWPALPVI ILTAHGSIQDAVEATRRGVHEFLTKPFDPPELLEQLEKALTARGGQTSDTAREAGRRHGLVTRSPRMEEVLERALLVADS DANVLIQGASGSGKEIVARAVHGNSPRSQGPFIPVNCGAIPETLLESELFGHVRGAFTGADRDRAGLFRDADGGTLFLDE IGDMPLQLQVKLLRALQEQVIRPVGGRDPIPINVRVISATHRDLEAARADGSFREDLYFRLAVVTLALPPLAERREDIPL LARHFLAEATRRHGRQVEDLSPEAIEALVQAEWPGNVRQLQNVIEQCVALSTNEILPERLVRQALNQDQEPSIPTLAEAR EAFERDYLIRLLKLTEGNVSQAARLAGRNRTEFYRLLGRHHLQVADFKGGTDPNEDN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 2e-60 | 43 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 2e-60 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hhal_1340 | YP_001002909.1 | Fis family two component sigma-54 specific transcriptional regulator | BAC0089 | Protein | 7e-83 | 45 |
| Hhal_1340 | YP_001002909.1 | Fis family two component sigma-54 specific transcriptional regulator | BAC0467 | Protein | 5e-83 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hhal_1340 | YP_001002909.1 | Fis family two component sigma-54 specific transcriptional regulator | VFG0116 | Protein | 2e-56 | 46 |
| Hhal_1340 | YP_001002909.1 | Fis family two component sigma-54 specific transcriptional regulator | VFG1249 | Protein | 1e-65 | 45 |
| Hhal_1340 | YP_001002909.1 | Fis family two component sigma-54 specific transcriptional regulator | VFG1214 | Protein | 1e-64 | 44 |
| Hhal_1340 | YP_001002909.1 | Fis family two component sigma-54 specific transcriptional regulator | VFG1248 | Protein | 2e-51 | 42 |
