Gene Information

Name : Hhal_1292 (Hhal_1292)
Accession : YP_001002865.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Unknown
Product : IS3 ORF2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1403501 - 1404007 bp
Length : 507 bp
Strand : +
Note : KEGG: sfv:SFV_1185 IS3 ORF2

DNA sequence :
GTGAAGTACGCGTTCATCGATCAGCAGCGTCACGAGCACCGGATCCAGGCGATGTGCCGCGTCCTTGGCGTCGCTCGCAG
CGGCTTCTACGCATGGTGCCGGAACAAGGCGGCCCGCGCCGCACGGGAAGAACGCCAGCAGGCCTTTGATGGGCAGGTGC
AAGAGGCCTTCGAAGACTCCAGGCAACGCTCTGGAGCGCCTCGACTGACGCGAGAGCTGGACGGGCAAGGCGTGTCGGCC
AATCGCAAAACCGTGGCCCGGAGCATGCGCCGTCAGGGCCTCCGGGCACGCACGTCACGCCGGTTTAAGGTGACGACGAA
CTCGGCTCACAGCCTGCCGGTCGCGCCAAACCACTTGGCCCAGCACTTTGAAGCCGAGCAGCGGAACCAGAAATGGACTG
GCGACATCACGTATTTGGCGACCGGCGAAGGATGGCTCTATCTCGCGGTCGTCCTGGATCTTTGTGGCCGCAAAGTGATC
GGTTGGGCCATATGCGCGAGCAGATGA

Protein sequence :
MKYAFIDQQRHEHRIQAMCRVLGVARSGFYAWCRNKAARAAREERQQAFDGQVQEAFEDSRQRSGAPRLTRELDGQGVSA
NRKTVARSMRRQGLRARTSRRFKVTTNSAHSLPVAPNHLAQHFEAEQRNQKWTGDITYLATGEGWLYLAVVLDLCGRKVI
GWAICASR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tra5_2 AAC28569.1 transposase Tra5 Not tested LEE Protein 1e-37 57
tnpB AAD44734.1 TnpB Not tested SHI-2 Protein 7e-20 48
S4832 NP_839235.1 IS3 orfB Not tested SHI-2 Protein 1e-19 48