Gene Information

Name : Hhal_1287 (Hhal_1287)
Accession : YP_001002861.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1399392 - 1399685 bp
Length : 294 bp
Strand : +
Note : PFAM: transposase IS3/IS911 family protein; KEGG: ssn:SSO_P025 IS3 ORF1

DNA sequence : 
ATGAGCAAGACCAAGGCGAAGTCCAAGCGCACACGCTACACCCAGGCCTATCGAGACGAGGCGCTGGCGTTGGCCGAGCG
CGTCGGCGTCAGCGAGGCGGCCCAGCAACTCGGGATCCAGCCGGCGCAGATCTACCAGTGGCGCACCAAGGCCCGGACCG
AAGCGGACCGCTCGCAGCGAGAGCGGGAGTTGGCCGAGGAGAATGCCCGGCTCAAGCGTCAGCTCTCGGAAGCGAATGAG
GAGCTGTCGATCACAAAAAAGGCCGCGGCGTACTTCGCGAAAAACCAGAAGTGA

Protein sequence : 
MSKTKAKSKRTRYTQAYRDEALALAERVGVSEAAQQLGIQPAQIYQWRTKARTEADRSQRERELAEENARLKRQLSEANE
ELSITKKAAAYFAKNQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 6e-11 53
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 6e-11 53
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 3e-10 51
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 3e-10 51
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 6e-13 50
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 6e-13 50
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 6e-13 50
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 8e-13 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hhal_1287 YP_001002861.1 transposase IS3/IS911 family protein VFG0603 Protein 2e-11 53
Hhal_1287 YP_001002861.1 transposase IS3/IS911 family protein VFG1632 Protein 1e-10 51