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Name : Hhal_1279 (Hhal_1279) Accession : YP_001002855.1 Strain : Halorhodospira halophila SL1 Genome accession: NC_008789 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : 2.7.7.7 Position : 1392160 - 1393431 bp Length : 1272 bp Strand : + Note : PFAM: UMUC domain protein DNA-repair protein; KEGG: ecj:JW1173 DNA polymerase V, subunit C DNA sequence : ATGCCGGTCTACGCGCTGGTCGACGTGAACAGCTTCTATGCGAGCGCCGAGCGGCTCTTTCGGCCGGATCTCGTGGGGCG ACCGGTGGTGGTGCTGTCCAATAATGACGGCTGCATCGTCGCCCGCTCCGCGGAGGCCAAAGCGCTGGGCGTGCCCATGG GTGAGCCGTACTTCCGTGTCCGCGACTGCCTGCGGGCCGCGGGCGCGGCGGTGTTCTCGTCGAACTACGCCCTGTACGCG GATCTGTCATCGCGGGTCATGCGCACCCTCGAGGCACTCGCCCCCGCGGTGGAGATCTACTCGATCGATGAGGCGTTCCT GGATCTCACCGGGCTCGACACACTGACCGACACCGAACGCTTCGGCCAGGAGGTCCGCGCCCGCATCCGGGGCGATGTCG GGTTGCCGGTATGCGTCGGCATCGGCCCGACCAAGACGTTGGCCAAGCTCGCCAACCATGCCGCGAAGCAGGATCCCGAA CGCCACGGCGTCGCCTGCCTGCGCGATCCGGCAGCGCGGGCCCGGGCGCTGCGGGCCACCCCGGTGAACGCGGTCTGGGG TGTCGGCCAACGGCTCGCCGATCGCCTGGCTGAGCTCGGCGTTCACACCGCCGAGGATCTCGCCAACTTATCGCCGAGGC GGATCCGTCAGCACTTCCCCGTGACCCTCGCACGGACGGCGGAGGAGCTGCGGGGCTGCGCCTGCCACGATCTTGAAAGC GAACCGGCACCCCGGCAGCAGATCGTCTGCTCGCGTACTTTCGGCACGCCGGTTCGTGACGAGCCGGCGCTTCGCGAGGC CGTCGCGGATTACGCGGTGCGCGCCGCGGAGCGCCTGCGCGAGACCGGACAGCACGCCGCCGCCCTCTCCGTCTTTCTTC GCACCGACCCGCACCGGACCGCGGAGCCGCAGCACATGCCCACGGCGACGCGGCGGCTGACGATTGCAACGGACGACACT CGCGACCTGTTGGCCGTTGCCCTTCGGATCGCCGAGGAGCTCTGGCGCCCCGGCCACGCCTACATCAAGGCCGGCGTGAT GCTCGGGGAACTCCAGGCTCCCGGGATCTCCGGTGATCTCTTCGCCGACGACGCGGCGCGGGCTCGATCGGCGGACCTGA TGCAAGCGGTCGATGCCATCAACCGTCGCCACGGCCGCGCTGCCGTGACCTACGGCGTCCAACGCCGGGGGCGTGCCGAA TGGCGAATGCGCCGCGACTACCTCTCCCCGGCCTACACGACGCGGTGGACGGATCTGCCGGTGGTGGGGTGA Protein sequence : MPVYALVDVNSFYASAERLFRPDLVGRPVVVLSNNDGCIVARSAEAKALGVPMGEPYFRVRDCLRAAGAAVFSSNYALYA DLSSRVMRTLEALAPAVEIYSIDEAFLDLTGLDTLTDTERFGQEVRARIRGDVGLPVCVGIGPTKTLAKLANHAAKQDPE RHGVACLRDPAARARALRATPVNAVWGVGQRLADRLAELGVHTAEDLANLSPRRIRQHFPVTLARTAEELRGCACHDLES EPAPRQQIVCSRTFGTPVRDEPALREAVADYAVRAAERLRETGQHAAALSVFLRTDPHRTAEPQHMPTATRRLTIATDDT RDLLAVALRIAEELWRPGHAYIKAGVMLGELQAPGISGDLFADDAARARSADLMQAVDAINRRHGRAAVTYGVQRRGRAE WRMRRDYLSPAYTTRWTDLPVVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 3e-81 | 47 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 3e-81 | 47 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 2e-56 | 47 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 2e-70 | 46 |
