Gene Information

Name : Hhal_1268 (Hhal_1268)
Accession : YP_001002845.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1374356 - 1375966 bp
Length : 1611 bp
Strand : +
Note : PFAM: thiamine biosynthesis protein ThiC; KEGG: aeh:Mlg_1316 thiamine biosynthesis protein ThiC

DNA sequence :
ATGGATTCCGCAACCACCCGTCCGCCGACCCCGGACCAGACCCGCGACACCAGCACCTGCCCGCTCAGCCAGGCTGTCCG
AGAGCGCGCCTGCGCTGCGGCCGGCCCGTTCCCGGCCTCGCATCGGGTCTACCTGCAGGGAAGCCGGGATGATCTGCGGG
TGGCCCTGCGAGAGATCGTCCAGAGCCCAACCCAGACCCCGAACGGACCGCGCGAGAATCCGCCGCTGCGGGTCTACGAC
ACCGGCGGCCCGTACACGGACCCCGAGGCGGAGCTCGACCCGGCGCGGGGGATCCACCCGATCCGTGCCCCCTGGATCGC
CGACCGCGGCACCGACGCGTGCACCCAGCTCGACTACGCGCGGGCTGGAGTGACCACCCCGGAGATGGAGTACATCGCCC
TGCGTGAGGGCCTGTCGGCCGAGTTCGTGCGCGATGAAGTCGCCCGCGGGCGGGCCGTGATCCCGGCGAACCACTGCCAC
CCGGAGGCCGAGCCAATGGCCATCGGCCGCCATCTCAAGGTCAAGGTGAACGCCAATATCGGCAACTCCCCGCTGAGCTC
CGGCATCCCGGAGGAGCTGGAGAAGCTCATCCACGCCGTGCGCTGGGGGGCCGATACGGTCATGGACCTATCCACCGGCG
AGGCCATCCACGAGACCCGCGCCTGGCTGCTCCGCAACTCGCCGGTGCCGATCGGCACCGTACCGATCTACCAGGCGCTC
GAGAAGGCCGGCCGCCCCGAAGACCTGACCTGGGAGGTGTTCCGCGACACCCTCATCGAACAGGCCGAACAGGGCGTGGA
CTACTTCACCATCCACGCCGGCGTGCGGCATGGCCACGTCGATCTGGCCCGCGGGCGGTTGACCGGAATCGTCTCCCGCG
GCGGGTCGATCATGGCCAAGTGGTGCAGCCACCACCAGGCCGAGAGCTTCCTCTACGAACGTTTCGATGAGATCTGCGAG
ATCCTGGCCCGCTACGACATCACCGTCTCGCTCGGTGACGGCCTGCGCCCTGGTTCTGTCGCCGATGCCTCCGACGAGGC
GCAGCTGGCCGAGCTGCGCACCCTGGGCGAACTCACGGAACGCGCCTGGGCGCGCGGCGTGCAGGTCATTATCGAGGGGC
CGGGTCACATCCCCATGAACCAGATCGAGGAGAACATGCGGCTACAGAGCGAGGCCTGCCTCGAGGCGCCGTTCTACACC
CTCGGCCCCATCGTGACCGACATCGCTCCCGGCTACGACCACATCACCTCGGCCATCGGCGCCGCCCAGATCGGCTGGCA
CGGCACAGCGATGCTCTGCTACGTGACCCCCAAGGAGCACCTGGGCCTGCCCAATGCCGACGATGTGCGCACCGGCATCG
TCACGTACAAGGCGGCGGCCCATGCGGCCGACGTGGCCCGCGGGCACCCCGGGGCACGCGATCGTGACGATGCCCTCTCG
CGCGCCCGTTACGAGTTCCGCTGGGAGGATCAGTTCAACCTCTCCCTGGATCCGGAACGGGCCCGCGCCTATCACGACGA
GACCCTGCCCAAGGCGTCCCATAAGGAGGCGGCGTTCTGCTCGATGTGCGGGCCCCGCCACTGCGCCATGGCGATCAGTC
AGGAACTCTGA

Protein sequence :
MDSATTRPPTPDQTRDTSTCPLSQAVRERACAAAGPFPASHRVYLQGSRDDLRVALREIVQSPTQTPNGPRENPPLRVYD
TGGPYTDPEAELDPARGIHPIRAPWIADRGTDACTQLDYARAGVTTPEMEYIALREGLSAEFVRDEVARGRAVIPANHCH
PEAEPMAIGRHLKVKVNANIGNSPLSSGIPEELEKLIHAVRWGADTVMDLSTGEAIHETRAWLLRNSPVPIGTVPIYQAL
EKAGRPEDLTWEVFRDTLIEQAEQGVDYFTIHAGVRHGHVDLARGRLTGIVSRGGSIMAKWCSHHQAESFLYERFDEICE
ILARYDITVSLGDGLRPGSVADASDEAQLAELRTLGELTERAWARGVQVIIEGPGHIPMNQIEENMRLQSEACLEAPFYT
LGPIVTDIAPGYDHITSAIGAAQIGWHGTAMLCYVTPKEHLGLPNADDVRTGIVTYKAAAHAADVARGHPGARDRDDALS
RARYEFRWEDQFNLSLDPERARAYHDETLPKASHKEAAFCSMCGPRHCAMAISQEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 1e-153 60
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 1e-153 60
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 2e-150 59