Gene Information

Name : Hhal_1217 (Hhal_1217)
Accession : YP_001002794.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1321402 - 1322817 bp
Length : 1416 bp
Strand : -
Note : KEGG: aeh:Mlg_0013 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp

DNA sequence :
ATGGCGCGTACCGGAGAAGATGTCCTCAAGCTGATCGAGGACGAAGACGTCAAATTCGTCGACCTTCGCTTTACTGACAC
CCGCGGCAAGGAGATGCACGTGACCTTGCCGGCCTCCCAGGTCGACGAGGATCTGTTCGAACACGGCTCCATGTTCGACG
GCTCCTCGATCCAGGGCTGGAAGGGGATCCAGGAGTCGGACATGATCATGCTCCCCGATCCCGACTCCGCCACCCTCGAC
CCCTTCTACGATGAACCCACCCTGAATCTGGTCTGCGACATCCTCGAGCCGAGCACCCTGCAGGGCTACGACCGGGATCC
GCGTTCGGTGGCCCGGCGCGCCGAGGCATACCTGGCCTCCACCGGCGTGGGTGACACCGCCCTGTTCGGTCCCGAGCCGG
AGTTCTTCGTCTTCGACGACGTCCGCTGGGGCGCCGACATGAGCGGGACCTTCTACAAGATCGACTCCGAAGAGGCCGGC
TGGAACTCCGAGCGGGTCTACAAAGACGGCAACATCGGCCACCGCCCCGGTGTGAAGGGCGGCTACTTCCCGGTACCGCC
GGTAGACTCGCTGCACGACATCCGTGCCGCCATGTGCCAGGCGATGGAGGAGATGGGCCTGGAGCCGGAGGTCCACCACC
ACGAGGTGGCGACCGCTGGGCAGTGCGAGATCGGCGTGGCTGCTCGCACCCTGGTCAAGAAGGCCGACGAGCTGCAGACG
CTCAAGTACTGCGTGCACAACGTCGCCCACGCCTACGGCAAGACCGCCACCTTCATGCCCAAGCCGCTGGTGGGCGACAA
CGGCAGCGGCATGCACGTGCACCAGTCGGTCTCCAAGGGCGGTAACAACATCTTCGCCGGGGACCAGTACGGCGGGCTCT
CCGAGGAGGCGCTCTACTACATCGGCGGCATCATCAAGCACGCCAAGGCGATCAACGCCTTCGCCAACGCCTCCACCAAC
AGCTACAAGCGCCTGGTGCCCGGCTTCGAGGCGCCGGTGCTGCTCGCCTACTCGGCGCGCAATCGCTCCGCCTCGGTGCG
GGTGCCCTATGTGGCCAACCCCAAGGCGCGGCGGATCGAGGTCCGCTTCCCGGATCCCACAGGCAACCCGTACCTGACCT
TCGCCGCCATGCTGATGGCCGGTCTCGATGGCATCCGCAACAAGATCCACCCCGGCGAGGCGATGGACAAGGACCTCTAC
GACCTGCCGCCGGAGGAGGAGAAGGAGATCCCCAAGGTCGCCTTCCAGCTCGACGAGGCGCTCGAGGCCCTGGACAACGA
CCGCGAGTTCCTCAAGCAGGGCGGAGTCTTCTCCGACGACCTGATTGACGCGTACATCCAATTGAAGATGGACGACGTCA
CGCGCCTGCGCATGACCACCCATCCGGTGGAGTTCGACATGTACTACAGCGTCTAA

Protein sequence :
MARTGEDVLKLIEDEDVKFVDLRFTDTRGKEMHVTLPASQVDEDLFEHGSMFDGSSIQGWKGIQESDMIMLPDPDSATLD
PFYDEPTLNLVCDILEPSTLQGYDRDPRSVARRAEAYLASTGVGDTALFGPEPEFFVFDDVRWGADMSGTFYKIDSEEAG
WNSERVYKDGNIGHRPGVKGGYFPVPPVDSLHDIRAAMCQAMEEMGLEPEVHHHEVATAGQCEIGVAARTLVKKADELQT
LKYCVHNVAHAYGKTATFMPKPLVGDNGSGMHVHQSVSKGGNNIFAGDQYGGLSEEALYYIGGIIKHAKAINAFANASTN
SYKRLVPGFEAPVLLAYSARNRSASVRVPYVANPKARRIEVRFPDPTGNPYLTFAAMLMAGLDGIRNKIHPGEAMDKDLY
DLPPEEEKEIPKVAFQLDEALEALDNDREFLKQGGVFSDDLIDAYIQLKMDDVTRLRMTTHPVEFDMYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 4e-105 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hhal_1217 YP_001002794.1 glutamine synthetase VFG1399 Protein 1e-108 50