Gene Information

Name : Hhal_1193 (Hhal_1193)
Accession : YP_001002770.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Virulence
Product : redoxin domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 1298158 - 1298655 bp
Length : 498 bp
Strand : +
Note : PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: aeh:Mlg_2579 redoxin domain protein

DNA sequence :
ATGGCAACCGTCACCCTTAAGGGCACCCCGTTCCGTACCTGCGGTGAGCTGCCGGGCACCGGCTCGGCAGCCCCGGATTT
CCGACTCGTCGACGGCGAGCTGCAGGACCACCGACTGGCCGACTTTGCCGGTCGTCGGCTGGTGCTCAACATCGTGCCGA
GCCTCGACACCCCAGTGTGCGGCGCGTCGGCCAAGCGCTTTGACGAGCTCGCCCGCGATAACACCGGGGTGACCTTCGCC
ACCGTCTCCGCCGATCTGCCCTTTGCCCAGCAGCGCTTCTGCGGCACCGAGGGCGTCGGCAACGTGGCGATGCTCTCGGC
CATGCGCGATGCGGCCTTCGCCCGGGATTACGGCGTGCGCATCGAGGAAGGCCCCATGGAGGGCCTGTGCGCCCGGGCCG
TGGTGATCATCGACGAAGGGGGGCAGGTGGCCTACACCCAGCTCGTCCCCGAGATCGCCGAGGAACCCGACTACGACGAC
GTGCAGCGCGCCCTGTGA

Protein sequence :
MATVTLKGTPFRTCGELPGTGSAAPDFRLVDGELQDHRLADFAGRRLVLNIVPSLDTPVCGASAKRFDELARDNTGVTFA
TVSADLPFAQQRFCGTEGVGNVAMLSAMRDAAFARDYGVRIEEGPMEGLCARAVVIIDEGGQVAYTQLVPEIAEEPDYDD
VQRAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-27 42
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-27 42
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 8e-28 42
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-27 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hhal_1193 YP_001002770.1 redoxin domain-containing protein VFG0087 Protein 5e-28 42