Gene Information

Name : Hhal_1156 (Hhal_1156)
Accession : YP_001002734.1
Strain : Halorhodospira halophila SL1
Genome accession: NC_008789
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 1263352 - 1263567 bp
Length : 216 bp
Strand : +
Note : PFAM: Prophage CP4-57 regulatory; KEGG: eli:ELI_14870 hypothetical protein

DNA sequence :
ATGGCTCATCCAGAAACTGCCGGCATTAAACCCAACGAGCGCTTGCTCCGTATCAACAGCGTTATCAAACGCGTCGGCCT
TGGCCGATCGACGATTTACAAAAAAGTAAAGGAAGGTGGCTTCCCAAAACCTATAAAACTGGGTGAGCGTGCCATCGCCT
GGCGGGAAAGCGACATTGAGGAATGGATTTCCCGCCGCCATCAAGCAGACTTCTAG

Protein sequence :
MAHPETAGIKPNERLLRINSVIKRVGLGRSTIYKKVKEGGFPKPIKLGERAIAWRESDIEEWISRRHQADF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 4e-10 56
unnamed CAA21398.1 - Not tested HPI Protein 2e-09 50
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 1e-09 50
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 2e-11 48
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 2e-11 48
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 1e-11 48
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 1e-07 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hhal_1156 YP_001002734.1 phage transcriptional regulator AlpA VFG1118 Protein 5e-12 48